Endozoicomonas euniceicola: NX720_10440
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Entry
NX720_10440 CDS
T08536
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eei
Endozoicomonas euniceicola
Pathway
eei03420
Nucleotide excision repair
eei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NX720_10440 (uvrD)
03430 Mismatch repair
NX720_10440 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eei03400
]
NX720_10440 (uvrD)
Enzymes [BR:
eei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NX720_10440 (uvrD)
DNA repair and recombination proteins [BR:
eei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NX720_10440 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NX720_10440 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
UYM18297
LinkDB
All DBs
Position
complement(2720960..2723131)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVTPIIDSLNDAQRQAVTAPLSSMLVLAGAGSGKTRVLVHRIAWLVQAEAISPYSIMAV
TFTNKAAAEMRSRIEDLLGIPPRGMWVGTFHGLSHRLLRTHYQDAGLPESFQILDSDDQL
RVVKRIMKAMQLDDQRWPPRQAQWYINSKKDEGLRPDYIDPGYDPFERTMLDVYRAYHQY
CEQMGVVDFGELLLRAHELFLKRPDILKHYRQRFRYVLVDEFQDTNAVQYAWLRLLVGDE
DKMMVVGDDDQSIYGWRGARIENIRQFTEDFPKSSTVKLEQNYRSTGRILNAANAVIANN
PDRLGKELHTDSGDGEAIQLYSGFNEMDEARFISDRISEAVNEGKSRSDIAILYRSNAQS
RNLEEALLRAGIPYRIYGGQRFFERAEIKNALAYLRLISTPHDDTSLERVINIPARGIGE
KTVEKLREAARTQDVSLWLAIKSVIANKAIGGKAGRSLAEFVDLIETLTAAGDDLDLGEL
TDRVITHTGLVAHHEKEKGEKGRARVENLEELVSACRQFDIDDLDLDEETETMSPLGAFL
ANAALEAGDAQADQFSDSVQMMTLHSAKGLEFPMVFLAGMEEGLFPHKMSLEEGNLEEER
RLCYVGITRAMEKLTLSYAENRRLYGKDTFNRPSRFIREIPGELIQEVRLGGTISRPATT
RQPASSAASAGLALGQRVHHDVFGEGTIVSAEGDGAQARVQVNFDSEGTKWLMMAYANLA
VIS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaccccgattattgactctctgaacgatgcccagcggcaggcggtaacagcc
ccgctgagttcgatgttggtactggccggagccggaagtggtaagaccagagtactggtg
catcgcattgcctggctggtacaggcagaagcaatatcgccttactccatcatggctgtt
accttcaccaacaaggccgcggcagaaatgcgctcacgcattgaagacctgctggggatt
cccccaagaggcatgtgggtgggtacattccatggtttgtctcaccgtctgttgcgaact
cattatcaggatgccggtctgccggaaagcttccagatactcgacagcgatgatcagctt
cgggttgtaaaacgcatcatgaaagcgatgcagctggatgatcagcgctggccgccaaga
caggcgcagtggtacatcaacagcaagaaagacgaagggcttcgcccggattatattgat
ccgggttatgacccgtttgaacgcactatgctggatgtttatcgagcctatcaccaatat
tgcgagcagatgggcgtggtcgattttggtgaactgttactgcgagcccatgagctgttc
ctgaaacgtccggatattcttaaacattaccgacagcgttttcgctatgttctggtggac
gaatttcaggataccaacgccgtacaatacgcctggttaagattactggtgggcgatgaa
gacaaaatgatggtcgtgggtgatgatgaccagtccatttatggctggcgtggtgcccgc
attgagaatatacgtcagtttaccgaagacttccctaagtccagcacggttaaacttgaa
cagaactaccgttccacaggcaggattctgaatgctgccaatgcagtaattgccaacaac
cctgaccgtcttggcaaagagttgcacaccgacagtggcgatggcgaagcgatccagctt
tattccggtttcaatgaaatggatgaggcaaggtttatttctgatcgcatcagcgaagcg
gttaacgaaggcaagtcccgtagcgacatcgccattctttatcgctctaatgcccagtcc
cgtaacctggaagaagcgttgctgagagccgggattccttatcggatttatggtggtcaa
cgtttcttcgaacgggctgaaatcaagaatgccctggcttacctgaggttgatcagcaca
ccccatgatgacacctctctggagcgggtgattaatattccggcacggggtattggcgag
aaaaccgtcgaaaaactcagggaagctgcccgtacacaggatgtatccctgtggctggcg
atcaagagtgtgattgccaacaaggctatcggtggcaaggccggacgttccctggctgag
tttgttgatctgattgaaacgctgactgcggcgggagatgatctggatcttggtgaactg
acggatcgtgtgattacccacaccggtctggtggcgcaccatgaaaaagagaagggtgaa
aaaggtcgtgccagggtagaaaaccttgaggaactggtgagcgcctgtcgtcagtttgat
attgacgaccttgatctggatgaagaaaccgaaaccatgagtccgctgggtgcctttctg
gccaatgcggcgctggaagccggtgacgctcaggctgaccagttttctgacagtgttcag
atgatgactctgcactcggcaaaaggtctggagtttcctatggtgtttcttgccggtatg
gaagagggtctgttccctcacaaaatgtcgctggaagaaggcaacctggaagaagagcgt
cgtctttgttatgtgggcattacccgtgccatggagaaactgacactcagctatgctgaa
aaccgtcgtttatatggtaaggatacttttaaccgcccttcccggtttattcgtgaaata
cccggtgaactgattcaggaagtgcgtctgggaggtacgatttcccgccccgccaccaca
cgacagccagcgtcttctgctgcgtctgccggactggcgcttgggcagcgggtacaccac
gacgtgtttggtgaaggtactattgtaagtgctgaaggtgatggggcgcaggcaagagta
caggtgaacttcgacagtgaaggcactaaatggctgatgatggcttatgctaatctggcg
gtgatttcctga
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