Endozoicomonas euniceicola: NX720_16645
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Entry
NX720_16645 CDS
T08536
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
eei
Endozoicomonas euniceicola
Pathway
eei02020
Two-component system
eei02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
eei00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NX720_16645
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NX720_16645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eei03021
]
NX720_16645
Transcription machinery [BR:
eei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NX720_16645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
RbcX
RRP4_S1
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UYM14514
LinkDB
All DBs
Position
4091737..4093227
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AA seq
496 aa
AA seq
DB search
MKPSLQLKMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEVLESNPMLESEEAIQDQESRD
QEASNTAEGEQLVDLNAQEPPASPESQEPEWSESIPRDLPVDSGWEEIYSSMPSGSDDEF
DPLSRSRTTESLQEHLQWQLNLTPTTDTDRVLGEAIIEAINPDGYLTTPLEDIYQSLVSD
PAFEELDTLDIDELKVMQHRIQQFDPVGCGSENLKACLSVQLAQLPSQTPFIHEAQKLID
FHLEALGSRDYSQIMRRTRMKEHQLKEALSLIQSLNPRPGSEVDQSEPEYITPDISVRKV
KERWVVELNSESLPRLRINNSYASMVQRANSSRDNQFMKNQLQEARWFLKNLQSRNDTLL
KVATRIVNVQQGFLEQGDEAMKPLVLADIAEAVDMHESTISRVTTQKYMHTPRGVYELKY
FFSSHVSTDSGGECSSTAIRALIKKLVQDENPKKPLSDNKIAGLLGEQGIKVARRTIAKY
RESMHIPPSNERKCLV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctctctacagcttaaaatgggtcagcagttgacgatgacaccgcaactgcaa
caagccattcgcctgttacagctttcgacactggatctgcaacaggaaatccaggaggtg
ctggagtccaacccgatgctggaaagcgaagaagccattcaggatcaggagagccgcgac
caggaagccagtaacaccgctgaaggtgagcaactggttgacctcaatgcccaggaaccg
ccggcctccccggagtctcaggaacccgaatggtcagaaagcatacccagggatctgcct
gtcgattccggctgggaggaaatctactccagcatgccgtcaggcagtgatgatgaattt
gatcccctgagtcgctcccgaaccactgagtccctgcaggaacacctgcaatggcaactg
aacctgacccccaccaccgataccgacagggtgctgggtgaagcgatcatcgaagccata
aaccctgatggttacctgacaacgccactggaagatatctaccagagtcttgtttcagac
cctgcgtttgaggaactcgacactctcgacatagatgagctgaaagtcatgcaacaccgc
attcagcagtttgacccggttggctgcggcagtgaaaacctgaaagcgtgcctgtccgta
cagctggctcaactgccgtcccagacaccctttattcacgaagctcaaaagctgatcgac
ttccatctggaagccctgggcagccgtgactacagccagatcatgcgccgcacccggatg
aaagagcatcagctcaaggaagcattgagcctgatacagagcctgaacccaaggcccggc
tctgaagtggatcaaagtgaaccggagtacatcactccggatatctctgttcgaaaagta
aaagagcgctgggtggtggaactgaattccgagtcactgccacgcctgcgtatcaacaac
agttatgcgtcaatggttcagcgggccaacagcagccgggacaaccagtttatgaaaaac
cagctgcaggaagcccgctggtttctgaaaaacctgcaaagccgcaatgacacattgctt
aaagtcgccaccagaatcgttaacgtccagcagggctttctggaacagggcgacgaagcc
atgaaaccgctggtgcttgccgacatcgctgaagcggtggacatgcatgaatcaactatt
tcacgggtcacgacccagaagtacatgcatacgcccaggggcgtctatgaactgaaatat
ttcttttccagccatgtcagcacagacagcggcggagagtgttcatccacggctattcgt
gcgctgatcaaaaagttggttcaggatgaaaatccaaaaaaaccgctcagtgacaacaaa
attgccggattgctgggagaacagggcataaaagtagcccgacgaaccatcgccaagtac
cgggaatcaatgcatatacccccttccaacgaacgtaagtgtctggtgtaa
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