Endozoicomonas euniceicola: NX720_19425
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Entry
NX720_19425 CDS
T08536
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
eei
Endozoicomonas euniceicola
Brite
KEGG Orthology (KO) [BR:
eei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eei03016
]
NX720_19425 (rnd)
Enzymes [BR:
eei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NX720_19425 (rnd)
Transfer RNA biogenesis [BR:
eei03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NX720_19425 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
UYM15021
LinkDB
All DBs
Position
complement(4797111..4798247)
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AA seq
378 aa
AA seq
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MPVSHPDPIWVTDNDTLATYCTQWLKLDAIALDTEFIRTDTFYPKPGLIQLGTGQEVFLL
DPLKIDNWQPFAQLLGSEQVVKVLHACSEDIEVFHILSGNKPAAIFDTQLAASYAGLGHS
LGYQNLLKTLLGVDLPKDATRSDWLQRPLTDIQVSYATLDVVHLLEVYQLLQQRLKPMPH
WNWLLEDCSNLSNGDLYPKPEEQWKEVKRAWQLRPRQLCVLKVLAEYREREARRSNVPRN
RVIPRGSLWPLARYMPDNIHSLSAIQDMRHSNIRHYGEEVLSLIEMARELPGEQHPKPLP
APLPKAAKEHGQRLKRYTSQKAEELNLPVELLMLGKILTPMLRSRLEYGLFKLPEQLQGW
RRTVFAEPMVEQLNQPEQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgccagtatcacaccctgatcccatctgggttacagacaacgacactcttgccacgtac
tgcacccaatggttgaaactggatgctattgcgctggacaccgaatttatccgtaccgat
actttctaccctaaacccggcctgattcaactgggtacaggtcaggaagtctttctgctg
gacccgctgaaaatcgataactggcaaccatttgcccagctgcttggcagtgagcaggtg
gtaaaggttcttcatgcctgcagtgaagatattgaagttttccatatcctctccggcaac
aaacccgccgccatttttgatacccagctggcagcctcctatgccgggctggggcattcg
ctgggctaccagaacctgttgaaaacgcttctgggcgtcgatctgccaaaagacgcgact
cgctccgactggctgcaacggcctttaaccgatattcaggtcagttatgcaactctggat
gtggttcacctgcttgaggtgtatcagcttctgcaacagcgactaaagccaatgcctcac
tggaactggttgctggaagactgttccaacctgtctaacggcgatctctacccaaagccg
gaagaacagtggaaagaggtcaagcgagcctggcagttacgacccaggcagttatgcgta
ctcaaggtactggcagaataccgtgagcgggaagcccgccgtagcaacgttcccagaaac
cgggtgatccccagaggatcattatggccactggcacgctatatgcctgacaatatccat
tcactgtcggctattcaggacatgcgtcatagcaatatccgccactatggggaagaagtt
ctcagcctgatcgaaatggccagagagctgccgggagagcaacacccgaaacctctgcct
gcccctttgcccaaagctgcaaaagagcatggtcagcgactcaaacgatacaccagccag
aaagctgaagaacttaacctccctgtggagttgctgatgctgggtaaaattctgacgccc
atgcttcgcagccgactggagtacggattgttcaaactgccagaacaattgcagggctgg
cgtcgcaccgtttttgctgaacccatggttgagcagctgaatcagcctgaacaataa
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