Endozoicomonas euniceicola: NX720_20485
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Entry
NX720_20485 CDS
T08536
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
eei
Endozoicomonas euniceicola
Pathway
eei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NX720_20485 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eei03400
]
NX720_20485 (sbcB)
Enzymes [BR:
eei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
NX720_20485 (sbcB)
DNA repair and recombination proteins [BR:
eei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NX720_20485 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NX720_20485 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NX720_20485 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UYM15215
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All DBs
Position
5069947..5071380
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AA seq
477 aa
AA seq
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MLKSFLWFDFETVGTNPATDWPSQFAAIRTDAELNEIGEPVNLFCKLPDDHLPNPMAALV
TGLTPQAVNARGLAEPEFIQRILDELMVPGTCAAGYNSIRFDDEVIRNSLYRNFHDPYLR
ERANGNSRWDLIDLVRMTGALRPDGIHWPKREDGFNSYKLEELTRANGIEHGAAHDALSD
VRATIALARLIREKQPKLFQFYLDHRFKDKAGALLGLHTKQPVVHVSGMFGLAKQCLAVV
LPLVEHPRNRNQVFVYDLSVDPAPLLAMSVEEIQDNLFTPRQEGETRERIPLKGVSLNKC
PALAPLKVLRAEDQARLNIDLDTCFRHREMLLNSPELAEKVQAVFAGSPGKETQDPDQML
YSGGFFSWADKRLMERIPEATPESLGNLHLSFEDGRLDEMLFRYRGRHYPETLDQEESLR
WHEFRRQRLSGQDSAVLGFSQFWSDLDSAKQGASADALKLLDQLAAYADQLQAGLVR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaagttttctctggttcgattttgaaaccgtgggcaccaatcccgccaccgac
tggccatcgcagtttgcggctattcgtaccgatgctgaactcaatgagattggtgagccg
gtcaaccttttctgcaagttgccggatgatcatctgcctaaccccatggcggcgctggtt
acaggcttaacgccccaggccgtcaatgccagaggcctggctgaaccggagtttatccag
cggattcttgatgagttgatggttcccggcacctgcgcggcaggttataactccatccgc
tttgatgatgaagtcatcaggaacagtctctatcgtaatttccatgacccctaccttcgg
gaaagagccaatggcaatagccgctgggatttgattgacctggtgcgtatgacaggggcg
ttacggcctgatggcatccattggcccaagcgggaagatggcttcaacagctataaactg
gaagaactgaccagagctaatggcattgagcacggagctgcccacgatgcgctgtctgat
gtccgtgccactatcgccctggcccggttgattcgggaaaaacagcctaagttatttcag
ttttatctggatcatcgcttcaaagacaaggccggagctttgctgggcctccatacaaag
cagccggttgttcacgtttccggcatgtttgggttggcaaaacagtgtctggccgtcgta
ctgcctctggttgagcacccccggaaccggaaccaggtgtttgtgtatgatctgagtgtt
gatccagcgcccttgctggcaatgtctgtggaagagattcaggacaacctgtttacccca
aggcaggaaggggaaacacgggagcgcattccgctgaaaggtgtcagtcttaataaatgt
ccggcactggcgcctctgaaggtattgagagcagaagatcaggcaaggctcaatatcgat
cttgacacctgctttcgtcatcgggaaatgctactgaacagcccggaacttgctgaaaag
gtacaggctgtctttgccggttcgcccggtaaagagactcaggaccctgatcaaatgctg
tactcgggtggctttttttcctgggcggataagcgcctgatggaacggattccagaggcg
accccggagtcacttgggaatttgcacttatcgtttgaagacggtcgtcttgatgaaatg
ctgttcaggtatcgtgggcgtcattaccctgaaacactggatcaggaagagtctctccgg
tggcatgagtttcgacgccagagattatccggccaggactccgctgtacttgggtttagc
cagttctggagcgatctggacagtgcgaagcagggggcttcggctgatgcgcttaagtta
cttgatcagttggccgcttacgctgaccaactgcaagccggtttagttcgttaa
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