Endozoicomonas euniceicola: NX720_21875
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Entry
NX720_21875 CDS
T08536
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eei
Endozoicomonas euniceicola
Pathway
eei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NX720_21875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eei03019
]
NX720_21875
03400 DNA repair and recombination proteins [BR:
eei03400
]
NX720_21875
Enzymes [BR:
eei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NX720_21875
Messenger RNA biogenesis [BR:
eei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NX720_21875
DNA repair and recombination proteins [BR:
eei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NX720_21875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UYM15469
UniProt:
A0ABY6GU42
LinkDB
All DBs
Position
complement(5390375..5392498)
Genome browser
AA seq
707 aa
AA seq
DB search
MKTTKQFYQEGLELLRRSLGDADACFHEHQWESIEELVVRQSRLLVVQKTGWGKSTVYFT
ATRLLRNEGKGPTIIISPLLALMRNQIESAAKYGVRLGTINSSNSNPENKQTERQLLADQ
LDAVIISPERLANEDFVEQVLLPVAGKVGLFVIDEAHCISDWGHDFRPDYKRIKHILPYM
PPNLPVLATTATASQRVMDDIAEQLGENIRVFRGQLVRESLHLQCLHFPRRSHRLAWLAD
TIPQIAGTGIVYTATIRDAEQVADWLRQQGIIAAAYYGDLPTDHRLALESALLNNQLKVL
VATSALGMGYDKPDLAFVIHYQSPGSVVSYYQQVGRAGRAIPQAWGALLSGDEDADIQNY
FINQAFPKEELVNEILQTLSDADNGLKKTELQRMINARPSKVESALKFLMAEKPAPVMKD
KSVYYRTPVRYELPHEAIARLCALKEREWAEMVEYLHHGDCLMQFLARALDDHDSQPCGK
CINCSGETNLPTTFSPETGQKAAEFLENVFIEIPPKKQVGNGVANAQARFPVYQFPPKFG
DLAHEPGRALCKWGEAGWGEIAKQGKRHRTFDVRLTAAAARLIRERWQPEPFPQWIAYVP
SQNHPELVADFAKNLAEKLGIPCYDVISKARLNRPQKLMENSEFRCHNLDGAFAVEDGIP
SGPVLLVDDAVDSGWTFAVLAALLRRAGSGAVYPFAVMSTASSSASD
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaacaaaacagttttaccaggaaggtctggaattattacgtcgcagccttggg
gatgccgatgcctgctttcatgaacatcagtgggaatccatagaggaactggtggttcgc
cagtcccgcctgttggtggtgcagaaaaccggctggggtaaaagtaccgtatattttacg
gcgacccgtttgctcagaaatgagggaaaaggcccgaccattattatttcgcccctgctg
gcactgatgcgaaatcagatagagtctgcggcaaaatatggggttcggcttggcactatt
aattcctcaaacagcaaccctgaaaacaaacagactgaacgacagttgctggctgaccag
ctggatgccgtgattatttctccggaacgtctggccaatgaggattttgttgaacaggta
ttgttgccagtggctggcaaagtcgggctgtttgtgattgatgaagcccactgtatttct
gactgggggcacgattttcgaccggattacaaacgcatcaagcatattctgccttatatg
ccaccgaaccttccggtgctggcaaccactgccaccgccagtcaaagggttatggacgat
attgctgaacagcttggggagaacatcagggtgttccgggggcagctggtgcgagagtct
ttgcatctgcaatgtttgcacttccccaggcgctctcatcgactagcctggctggcggat
actattccacagattgccggaaccgggattgtttataccgcaaccattcgagatgcggaa
caggtggctgattggttgaggcaacaggggatcattgccgcagcttactatggcgacttg
ccaaccgatcatcggctggcactggagtctgcactgctgaacaatcagttaaaggtgctg
gttgccacttctgctctgggtatgggctatgacaagcctgaccttgcttttgttattcac
taccagagtccggggtcggtagtcagttattatcagcaggtcggcagggcaggcagagcg
attccgcaggcctggggagctttactgtctggcgatgaagatgcggatattcagaattat
tttattaatcaggcctttcctaaagaagagctggtgaatgagattcttcagacattaagt
gatgccgataatgggctgaagaaaaccgagcttcagcgtatgatcaatgcccgcccatcg
aaagttgagtcggccctgaagtttttgatggcagaaaaaccggctccggtgatgaaggat
aagagcgtttattatcgaacccctgttcgttatgaactgccccatgaagctatcgcccgg
ctttgtgcattaaaggaacgagagtgggccgaaatggtggagtatttgcatcatggggat
tgtctgatgcaatttctggctcgggctctggatgatcatgattctcaaccttgcggtaag
tgcatcaactgctcaggtgaaactaatctgccgactacattcagccccgaaacagggcag
aaggcggcagagtttctggaaaatgtgtttatcgagatacctcctaaaaaacaggtaggt
aacggggtcgctaatgctcaggcacgttttcctgtgtatcagtttccgccaaagtttggt
gatctggcccatgaacccggcagggctttatgcaaatggggtgaagcaggttggggtgaa
attgccaaacaaggtaagcgacatcgtacatttgatgttcgtctgactgctgcggctgcc
cggttgatcagggagcgctggcaaccggaacccttcccgcagtggattgcttatgttcct
tctcagaatcacccagagctagtagcagactttgcaaaaaatttagccgaaaaactgggc
ataccctgttacgatgtaatcagtaaagcacggctaaacaggcctcagaaattgatggaa
aatagcgagttccgctgccataaccttgatggtgcctttgctgttgaagatggcatcccc
tccgggccggttctactggtggatgacgctgttgattccggatggacctttgccgttctt
gccgcattgcttcggagagctggctcgggcgctgtttatccatttgccgttatgtcgacg
gcttcaagttcggcctcagattaa
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