Eubacterium eligens: EUBELI_01701
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Entry
EUBELI_01701 CDS
T00908
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eel
Eubacterium eligens
Pathway
eel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EUBELI_01701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eel03019
]
EUBELI_01701
03400 DNA repair and recombination proteins [BR:
eel03400
]
EUBELI_01701
Enzymes [BR:
eel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EUBELI_01701
Messenger RNA biogenesis [BR:
eel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EUBELI_01701
DNA repair and recombination proteins [BR:
eel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EUBELI_01701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
SpoU_sub_bind
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
ACR72692
UniProt:
C4Z3A2
LinkDB
All DBs
Position
complement(1764920..1766575)
Genome browser
AA seq
551 aa
AA seq
DB search
MDKYGILKHYFGYDSFRPGQEKLVDAILAGQDVLGIMPTGAGKSLCYQVPALLMSGITLV
VSPLISLMKDQVGALNQAGVHAAYINSSLTDNQITKALAYAKQGRYKIIYVAPERLETWG
FLDFATHVEISMITVDEAHCISQWGQDFRPSYLNILSFVKKLARRPIISAFTATATSKVR
DDILQILSLERPVILTTGFDRSNLTFKVKHIKDKDSYILDYLVSHRQDSGIIYCATRKNV
EKVYDMLNANGLSVTKYHAGLSAEERKENQDSFIYDIKPVVVATNAFGMGIDKSNVRFVI
HYNMPQCIENYYQEAGRAGRDGEDSECVLLYSPQDIMINKFFIEHREPNPDIDAEEQARL
MILDKRRLNAMVDYCKTTGCLREYILKYFGERPDNPEGGRYNCHNCSNCVVDEAEQEADE
AYMYPGNRFSAPVSRNAAMVADRMKRSAAAAKSAYATSKSKKPEDALNDRGVMLFNRLRE
LRKQIAVSVGVPPYVIFSDRTLIDMCLKVPFNQEEMLSVSGVGENKYERYGKVFMDEIYD
FLDGMKQNLAR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacggaatattaaagcattattttgggtatgattcatttcgtccaggtcag
gaaaagttagttgatgctattcttgctgggcaggatgtgttaggaattatgcctacaggt
gcgggaaaatcattatgttatcaggtgccggcattgttaatgtccggcattactcttgtt
gtatctccacttatatcgctaatgaaggatcaggttggagcacttaatcaggcaggtgta
catgcagcttatattaacagttctcttacagataatcagataactaaggcactcgcatat
gcaaagcagggacggtataaaattatatatgttgcacctgaaaggctggaaacctgggga
tttcttgattttgccacgcatgtagagatatctatgattactgtagatgaagctcactgt
atatcacagtgggggcaggatttcagaccaagttatctgaatatattgtcatttgttaag
aagctggcaaggcgtcctataataagcgcatttacagctacagcgacaagcaaagtaaga
gatgatatattgcagattctttccctcgaaagaccggtaatactcactacaggttttgac
agaagcaatctgacattcaaggtcaagcatattaaggacaaggattcatatatacttgat
taccttgtaagccacagacaggatagtggaattatatactgtgctacaagaaaaaatgtt
gaaaaagtctatgacatgcttaatgccaacggactttctgtgactaagtatcatgcaggt
ctctcagcagaagagagaaaagaaaatcaggattcatttatatatgatatcaagccggtt
gttgttgcaactaatgcatttggaatgggaattgacaagtcaaatgtaagatttgtaatt
cattataatatgccgcagtgtatagagaattattatcaggaggctggacgtgccggaaga
gatggagaggattcagaatgcgtattgctgtattctccgcaggatatcatgataaataag
tttttcatagaacacagagagcctaatcctgatattgatgcagaagaacaggcacggctt
atgattcttgataaaagaaggcttaatgcaatggtcgattactgcaagacaacaggttgt
ttaagagagtatatacttaaatattttggagaaagaccagacaatccagagggtggaaga
tataactgccataactgctctaattgtgtcgttgatgaggcagagcaggaagcagatgag
gcttatatgtatccgggaaaccgtttcagtgcacctgtatcaaggaatgctgcaatggtg
gcagacagaatgaagcgttctgctgctgctgcaaaatcagcatatgcaacatctaagtca
aagaagccggaggatgcacttaatgacagaggtgttatgttgtttaacagactgcgtgag
ttaagaaaacagatagctgtttcagtaggcgttccgccatatgtaatattttcagacagg
acgcttatagatatgtgtcttaaagttccgtttaatcaggaagaaatgctgtcagtaagc
ggtgtcggtgagaataaatatgagcgctatggcaaggtgtttatggatgaaatatatgat
tttctcgatggtatgaagcagaatctggcaagatga
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