Enterobacteriaceae endosymbiont of Macroplea mutica: GJT87_01550
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Entry
GJT87_01550 CDS
T07660
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eem
Enterobacteriaceae endosymbiont of Macroplea mutica
Pathway
eem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GJT87_01550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eem03019
]
GJT87_01550
03009 Ribosome biogenesis [BR:
eem03009
]
GJT87_01550
Enzymes [BR:
eem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GJT87_01550
Messenger RNA biogenesis [BR:
eem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GJT87_01550
Ribosome biogenesis [BR:
eem03009
]
Prokaryotic type
rRNA helicases
GJT87_01550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
Cas3-like_C_2
DUF6901
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QJC31323
UniProt:
A0A6H2FB66
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All DBs
Position
complement(313597..315216)
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AA seq
539 aa
AA seq
DB search
MYINMTNNNFLQFKLNNNIIKALNNIGYTIPTPIQKECIPYLLLKKDVLGIAQTGSGKTA
AFILPLLNNLKPQIKNIQILILTPTRELAIQIATFASFFSKFIYGVHVLSLYGGQSYHIQ
LRGLRLKPQIIVATPGRLLDHIKRKTINLSTTTSLVLDEADEMLRMGFIEDVEQILSVIP
EGYQTALFSATMPYKIKKITKKFMHDPHEIKIQSDNNTIPHINQSYCIIHVNKIDVLMKF
LEVESYDAVLIFVKTKNSTLEVAHKLNNYGYNSAPLNGDMNQNIREKTLNSFKNAQLEIL
IATDVAARGLDVKRIDLVINYDIPMDAESYIHRIGRTGRAGRTGSALTFVEYREKRLLKN
IAYFTKFNIIEKKIPHTSFLSQKRLEKFIMKIHSTLKSYDIEQYKNILLTKPFEEFVDKE
LLTAVLLKIAQGNRPLVFPPEVVNTVKNKFLRTNKKKYLHENMIMYKINIGKKDGVEIRH
IVGAIINKILIPSNNIGNVKLFDYYSLVELSKKNIHSIKTITNIKILNKIITFKKVNHY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtatattaacatgactaataataattttcttcaatttaaacttaataataatattatt
aaagctttaaataatattgggtatactataccaacacctatacaaaaagaatgtattcca
tatttattattaaaaaaagatgttttaggcatagcacaaactggtagtggtaaaactgca
gcatttatattgccactattaaataatttaaaaccccaaataaaaaatattcaaattttg
attttaacaccaactagagaattagctatacaaatagcaacatttgcatccttcttttct
aaatttatttatggtgttcatgtattatcattatatggcggtcaatcttatcatatacaa
ttacgtggtttacgtttaaaaccgcaaatcattgttgctacaccaggaagattattagat
catattaaacgaaaaactattaacttatctactactactagtttagtattagatgaagca
gatgaaatgttaagaatgggttttattgaagatgtagaacaaattttgtctgttatacct
gaaggttatcaaacagcattattctctgcaactatgccatataaaataaaaaaaattact
aaaaaatttatgcatgatccacatgaaattaaaatacaatctgataataatactataccc
catattaatcaaagttattgtattatacatgtaaataaaatcgatgtattaatgaaattt
ttagaagttgaatcttatgatgctgtattaatttttgtaaaaactaaaaactctacttta
gaagtagcacacaaattaaataattatggatataatagtgcgccattaaatggtgatatg
aatcaaaatataagagaaaaaactttaaatagttttaaaaatgctcaattagaaatttta
atagctacagatgtcgctgctagaggattagatgtcaaaagaattgatttagttattaac
tatgatattcctatggatgctgaatcttacatacatcgtattggccgtactggtagggcg
ggacgcactggtagtgcattaactttcgtagaatatagagaaaaacgtttattaaaaaat
attgcatattttactaaatttaatattatagaaaaaaaaataccacatacatctttttta
agtcaaaaaagattagaaaaatttattatgaaaatacatagtacattaaaaagttatgat
attgaacaatataaaaatattttgttaacgaaaccatttgaagaatttgtagataaggaa
ttattaacagctgtattattaaaaattgcgcaaggtaataggcctttagttttccctcca
gaagtagttaatacggttaaaaataaatttttacgtacaaacaaaaaaaaatatttacat
gaaaatatgataatgtataaaataaatatagggaaaaaagatggagtagaaatacgtcat
atagtaggtgctattattaataaaatattaatacctagcaacaatattggtaatgttaaa
ttatttgattattattctctcgtagagttatctaaaaaaaatattcattctattaaaaca
ataacaaatataaaaattttaaataaaataattacttttaaaaaagtaaatcattattaa
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