Enterobacteriaceae endosymbiont of Macroplea mutica: GJT87_02070
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Entry
GJT87_02070 CDS
T07660
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
eem
Enterobacteriaceae endosymbiont of Macroplea mutica
Pathway
eem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GJT87_02070 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eem03400
]
GJT87_02070 (recD)
Enzymes [BR:
eem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GJT87_02070 (recD)
DNA repair and recombination proteins [BR:
eem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GJT87_02070 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
RecD_N
NAT10_TcmA_helicase
AAA_11
SH3_13
UvrD-helicase
SLFN-g3_helicase
PhoH
PIF1
nSTAND3
DEAD
ResIII
AAA_22
NTPase_1
NPHP3_N
MeaB
AAA
RsgA_GTPase
nSTAND_NTPase5
SRP54
NB-ARC
NACHT
cobW
DUF7740
AAA_25
AAA_14
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QJC31410
LinkDB
All DBs
Position
complement(423279..425138)
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AA seq
619 aa
AA seq
DB search
MHRLLKLLSQSKLFQEIDLQFANILISHTQPELMFAVSYLSKFVRDGNICLPISQLNLKK
IFYDNKTLLNKIHKFFSSNINWEKKLLSYSYIVSNGKEMQITPFIIEHKCFYMYRMWKLE
NTIVNHFLNNKYYVQYITQIKNHLNDLFYDVNNISQKIAIITALMHRISIITGSPGTGKT
TIIAKIILAFIKIKKNVIIHIIAFTGKAANRITESLNVFFSLLPLSVVTQEEAKQIPHNA
TTIHNFFKINVYKKTTIFNQQNQLNTQLLIVDEASMIDLHLMAMILDSLPKNSSLVLLGD
EYQLPPINTGYLLQDICYFKKFNITKAYKNFLTTMLMTMKINKNNTTCYIRNCIHTLTKN
YRYKHSSGIHKLALSIKKKRIKDIQSVFSTHKYYDVQYININSIKIYNNMIQNHIIYFKQ
YFYYIKHYNDIKNIDNYFHNLKNYQILCAIKNGLFGTNIMNNKLDNIFSEQKYSFHYMES
IWYPGKPIIITKNNHLLNLFNGDIGITIWNQKKKKLQIIFQLPHHQYKFINIDELPEHDM
SYAITIHKAQGSEFNHVALILPNKFTSILNRELIYTAVTRAKKKIYIFSPYNIFFQTIQQ
KIKRYSNFKKKLLLHNIIN
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtttattaaaactattatctcaaagtaaactatttcaagaaatcgatttacaa
tttgcaaatattttaataagtcatacacaaccagaattaatgtttgctgtgtcatattta
agtaaatttgtacgagatggtaatatatgtttaccaatatcacaattaaatctaaaaaaa
attttttatgataataaaactctattaaataaaattcataaatttttttctagtaatatt
aattgggaaaaaaaattattatcatattcatatatcgtaagtaatggtaaagaaatgcaa
attacaccctttataatagaacataaatgtttttatatgtatagaatgtggaaattagaa
aatactattgttaatcattttctaaataataaatattatgtacaatacattacacaaata
aaaaatcatctaaatgatctattttatgatgttaataatatatctcaaaaaatagctatt
ataacagctttgatgcatagaatcagtattattacaggttctccaggaacaggtaaaacc
actattatagcaaaaattattttggcttttataaaaattaaaaaaaatgtaataatacat
attattgcttttacaggtaaagctgctaatagaataacagaatcattaaatgtatttttt
agtttattacctctttcagtagtaacacaagaagaagctaaacaaataccacataatgct
acaactatacataatttttttaaaattaatgtatacaaaaaaactaccatatttaatcaa
caaaatcaattaaatacacaattattaattgttgatgaagcatctatgattgatttgcat
ctaatggctatgattttagatagtttacctaaaaatagttctttagttttattaggtgat
gaatatcagttacctccaataaatactggttatttattacaggacatatgttattttaaa
aaatttaacattaccaaagcttataaaaattttttaacaacgatgttaatgactatgaag
attaataaaaataatacaacatgttatattcgtaattgtattcatacattaacaaaaaat
tatcgttataaacattcctcaggtatacacaaattagctctatctattaaaaaaaaacgc
ataaaagatatacaaagtgtattttcaacccataaatattatgacgtacaatatattaat
attaatagtattaaaatatataataatatgattcaaaatcatattatatattttaaacaa
tatttttattatattaaacattataatgacataaaaaatattgataattattttcataat
ttaaaaaattatcaaattttatgtgctattaaaaatggtttatttggaacgaatataatg
aataataaactagataatatattttctgaacaaaaatatagttttcattatatggaatca
atttggtacccaggtaaacccatcattattactaaaaataatcatttattaaatttattt
aatggtgatataggtataaccatatggaatcagaaaaaaaaaaaacttcaaataattttt
caattacctcatcatcaatacaaatttattaatattgatgaattacctgaacatgacatg
tcttatgcgattaccatacataaagcacaaggatcagaatttaatcatgttgcattaatt
ttaccaaataaatttacttctatattaaatagagaattaatttatactgctgtaaccaga
gctaaaaaaaaaatatatatttttagtccatataacatattttttcaaacaatacaacaa
aagataaaacgttattctaattttaagaaaaaacttttactacataatattataaactaa
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