Elizabethkingia anophelis JM-87: BBD30_01055
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Entry
BBD30_01055 CDS
T04743
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
een
Elizabethkingia anophelis JM-87
Pathway
een03420
Nucleotide excision repair
een03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
een00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBD30_01055
03430 Mismatch repair
BBD30_01055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
een03400
]
BBD30_01055
Enzymes [BR:
een01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBD30_01055
DNA repair and recombination proteins [BR:
een03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBD30_01055
MMR (mismatch excision repair)
Other MMR factors
BBD30_01055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AQW92884
LinkDB
All DBs
Position
239685..241364
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AA seq
559 aa
AA seq
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MSIELLSDTLIDTTHHFKVSAGPGAGKTFWVVNHIKNVIQNSKILTASKKILCITYTNTA
AETIQNRLGSSSLQVEVLTIHSFLYNHLIKPYISFIAESYDFEVSSLDGHDDTIHSNYQF
IQEWKTKTKQLRIKDDNAIIAAFERMRWKLDNDELIVKPDYPMKADDYAIKNTSYYEYKK
MAWTKGTLHHDDVLFFAFHILKKFPYISKVISSKFPYIFIDEFQDSNPIQVSIIKNFAKL
STIGVIGDIAQSIYEFQGADSKQFQTFNLNNSKTYHLNKNRRSSNEIIDFLNIIRTDLKQ
DYHRNISFPKPILFVGDMVEALKQAKTNCPGENIHTLAWDNLTSNAMKIEINGSSLDREL
LKKLKQIDSNSHRANLIYHSINAIALAKESKFKEAIKFLEKYITYKNDKIGGKKKALRYL
TKMLKNFDAYKNSSLLEFSNYLKTEIDNSLAKVTAGKAKEFYESNSFQNLFLCVNILEDT
SLNRTIHKSKGDEFRNVLLVVKDQKNLEFIHSPKLHEKEEHRIYYVGVSRAQNRLFICVP
TLDNETEELLKDKISIQTV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatagaactattatccgatactttaattgatacaactcatcactttaaagtgtca
gctggccctggagcaggaaaaacattttgggttgtgaatcatatcaaaaatgttatacaa
aactccaaaattctaaccgcatccaaaaaaatactttgtattacatatacaaatacagca
gcggaaacaatccaaaataggttaggttcttcttcacttcaagttgaagtattaaccatt
catagtttcctgtacaatcatctaatcaagccttacatttcattcattgctgaaagttat
gattttgaagtgagttccttagatggacatgatgatacaattcattcaaattatcaattt
attcaggaatggaagacaaaaacgaaacaactaagaattaaggatgataatgcaataatt
gctgcatttgaaagaatgagatggaagcttgacaatgatgaattaattgtcaaacctgac
tatcccatgaaagccgacgattacgctataaaaaatacttcctattatgaatataaaaaa
atggcatggactaaagggacgcttcatcatgacgacgtattattctttgcttttcatatt
ttaaaaaagttcccttacatatccaaagtaatttcctcaaaattcccctatatatttatt
gatgagtttcaagatagtaatcctatccaagtttcaattatcaaaaattttgcaaagtta
tctacgataggtgttattggagacatagcacaatcgatctatgaatttcagggtgcggac
tcaaaacaatttcaaacttttaatttaaataattccaaaacgtatcatcttaataagaat
agacgaagttcaaatgaaataatagatttcctcaatattattagaacggatttaaaacaa
gattatcacagaaatatttcatttccaaaacctattttatttgttggtgatatggtcgaa
gctttaaaacaagcgaagacaaattgccctggagagaatattcatacattggcatgggat
aatctcacttctaacgcaatgaaaattgaaattaatggatcctctttggatcgggaactt
ttaaaaaaactaaagcaaatagattcaaattcacatcgtgcaaacttaatttaccattca
ataaacgcaatagctcttgcaaaagaatctaaattcaaagaagcaattaaatttcttgaa
aagtatataacttataaaaacgataagattggtggtaaaaaaaaggctcttcgttaccta
actaaaatgctcaaaaactttgatgcctataaaaacagttcattgttagaattctcaaac
tacttaaagactgaaatcgataatagtttagcgaaagtaacagcgggaaaagctaaagaa
ttttatgaatccaattcttttcaaaatctctttctttgtgtaaacatcttggaagatact
agtttaaataggacaatacataaatccaaaggagatgaatttagaaatgttcttctagtt
gtaaaagaccaaaagaacctcgaatttatccattctcctaaattacatgaaaaggaagaa
catagaatatattatgttggtgtaagtagagctcaaaataggttatttatttgtgtcccc
actttagataatgaaacagaagaacttttaaaagacaaaatttccatccaaacagtatag
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