Elizabethkingia anophelis JM-87: BBD30_07450
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Entry
BBD30_07450 CDS
T04743
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
een
Elizabethkingia anophelis JM-87
Brite
KEGG Orthology (KO) [BR:
een00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
een03016
]
BBD30_07450
Enzymes [BR:
een01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BBD30_07450
Transfer RNA biogenesis [BR:
een03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BBD30_07450
Prokaryotic type
tRNA splicing ligases
BBD30_07450
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AQW94044
LinkDB
All DBs
Position
1605239..1606630
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AA seq
463 aa
AA seq
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MGNLKLKGKDILKIGYPNNQSVNVALEVMKRNFATKNIHYVKSLLKEILLHPENYQKDLS
FGQIAEALLLSKKTEKRMLNNQRAAFQVFGHNISEEAKNQLYTALKLPISLQGALMPDAH
SGYGLPIGGVLAVENAVIPYGVGMDIGCRMSLSILDTPVSYLDGAKDKYEKALAEHTKFG
MYETHKSHIEHEIFERDTFGMIPVLRRLKAKAIKQMGTSGGGNHFVEFGEVEITEEDSQI
GLPKGKYLGILSHSGSRSLGAEIAQYYSRVAVEQCPLPKEAQQFAWLDLSTHMGLEYWTA
MTLAGDYASACHDDIHRRLVKAVGGRVKAKIENHHNFAWKEIHNGKEVIVHRKGATPANE
NELGMIPGSMTAKGFIVRGKGNPDSLHSASHGAGRAHSRGACRSLFTQSDIRKELQLKNV
TLMGGNTEEAPMAYKDIHEVMNAQSELVDILGTFQPRIVRMDK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatttaaaacttaaaggaaaagatatattaaagattggctatcctaataatcag
agtgttaatgttgctctggaagtcatgaaaagaaattttgcaactaaaaatattcattat
gtaaaatctcttttaaaagaaattctattacatccggaaaactatcaaaaagacttaagt
ttcggacaaatagcggaagctttattattatctaaaaagactgaaaaacgaatgctgaat
aatcagagggctgcatttcaggtttttggacataatatttcagaggaggcaaagaatcag
ctttatactgctctaaaattgccaatatcgcttcagggagcattaatgcctgatgcacat
agcggttatggactgcctattggtggtgttttggccgtagaaaatgctgtaattccatac
ggggtaggaatggatattggttgcagaatgagtcttagtattctggatactccggtttca
tatctggacggagcgaaagataaatatgaaaaagcactggcagaacataccaaattcggg
atgtatgaaacccataagtctcatattgagcatgagatttttgaaagagatactttcgga
atgattccggtgctgcgaagactgaaagcaaaagctattaaacagatgggaacatccgga
ggcggaaaccatttcgtagaatttggtgaagtggagatcacggaagaagatagccaaatc
ggccttccaaaagggaaatatctggggattttatctcatagtggctcccgtagtctggga
gcagagattgctcagtattattccagagttgctgtagagcaatgtccgttgccaaaagaa
gcacagcagtttgcttggttggatctcagtactcatatgggcttagaatactggaccgca
atgaccctggccggagattatgcttcagcctgtcacgatgatattcaccgcagattggtt
aaagccgtaggtgggagagtgaaagctaaaatagaaaatcatcacaactttgcctggaaa
gaaattcataatggaaaagaagtgattgttcaccgtaagggagcaaccccggctaatgaa
aatgaactgggaatgattccgggatctatgacggccaaaggatttattgttcgcggaaaa
ggtaacccggattcattacattcagcttcccatggtgccgggagagcccattccagagga
gcatgcagaagtctttttacacaaagtgatatcaggaaagaactccaattaaagaatgta
acactaatgggcgggaatactgaagaagctccaatggcgtataaagatattcatgaagta
atgaatgcacaaagcgaattagtagacattctgggaacatttcaaccgagaattgtaaga
atggataagtag
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