Elizabethkingia anophelis JM-87: BBD30_08500
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Entry
BBD30_08500 CDS
T04743
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
een
Elizabethkingia anophelis JM-87
Pathway
een03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
een00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBD30_08500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
een03021
]
BBD30_08500
03400 DNA repair and recombination proteins [BR:
een03400
]
BBD30_08500
Enzymes [BR:
een01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBD30_08500
Transcription machinery [BR:
een03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBD30_08500
DNA repair and recombination proteins [BR:
een03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBD30_08500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
NPL
Motif
Other DBs
NCBI-ProteinID:
AQW94239
LinkDB
All DBs
Position
1852598..1853593
Genome browser
AA seq
331 aa
AA seq
DB search
MAILSFIKPDKVILLNSTDFRGQFEFRPLEPGFGLTIGNALRRVLLSSLEGFAISSIKIE
GVEHEFSTIPGVIEDVTEIILNLKQLRLKAKTEGATAEQVSVKVTGKEEITAGDFASAIN
GFEVLNPDLVICTLNKDVNFEITFNIEKGRGYVPSDQNKSNNAPIGTIAIDSIFTPIKKV
QYSIENYRVEQKTDYEKLILDIETDGSITPQNALTEASKILIYHFMLFSDERITLETEAV
KASAQYDEETLHTRQLLKSKLADMDLSVRALNCLKAAEVETLGELVSFSKSDLMKFRNFG
KKSLTELEELVHAKGLNFGFDVSKYKLDADK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattatcttttattaaacccgataaagtaatccttcttaactcaacagacttc
agaggtcaattcgaattcagacctttggagccaggtttcggtttaacaatcgggaatgca
ttgagaagagttttactttcttctctagaagggtttgctatttcatctatcaaaattgaa
ggtgtagagcatgaattttctactatccctggtgttattgaagatgtaacagaaatcatc
cttaaccttaaacaacttcgtctaaaagcaaaaaccgaaggtgctacggcagagcaggtt
tctgtaaaagtgacgggtaaagaggaaattactgctggtgactttgcttcagctattaat
ggctttgaagtactaaacccggatttagtgatctgtactcttaataaggatgttaacttt
gagataactttcaatattgagaaaggtagaggttatgttccgtcagatcaaaataaatct
aacaatgcaccgataggcactatagcgatcgactctatttttaccccaatcaaaaaggta
caatatagtatcgaaaactatcgtgttgagcagaaaactgactacgagaaacttattctt
gatatcgaaactgatgggtctatcactcctcagaacgctttaactgaagcatctaaaata
ttaatttaccactttatgttgttctctgatgagcgtatcactcttgagactgaagccgtt
aaagcttctgctcagtacgatgaggaaacgcttcacacaagacaacttcttaagtctaaa
cttgcagatatggatctttctgtaagagctcttaactgccttaaagcagctgaagttgaa
acattaggtgagttagtttctttcagcaagtcggatctaatgaaatttagaaacttcggt
aagaaatcccttactgaactggaagagctagttcatgccaaaggacttaactttggtttt
gacgtaagtaaatataagttggacgctgataaataa
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