Elizabethkingia anophelis JM-87: BBD30_13245
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Entry
BBD30_13245 CDS
T04743
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
een
Elizabethkingia anophelis JM-87
Pathway
een03030
DNA replication
een03430
Mismatch repair
een03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
een00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBD30_13245
03430 Mismatch repair
BBD30_13245
03440 Homologous recombination
BBD30_13245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
een03032
]
BBD30_13245
03400 DNA repair and recombination proteins [BR:
een03400
]
BBD30_13245
Enzymes [BR:
een01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBD30_13245
DNA replication proteins [BR:
een03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBD30_13245
DNA repair and recombination proteins [BR:
een03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBD30_13245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AQW95073
LinkDB
All DBs
Position
2915184..2919845
Genome browser
AA seq
1553 aa
AA seq
DB search
MFLIFDTETTGLPRNFNAPLTDFDNWPRMVQIAWQLHDEHGNLIENQDYIIKPEGYDIPF
NAYRIHGISTEMAMREGRDLKEVLNEFKEVLKKTKVVAGHNVSFDYSIVGSEFLRKELED
NLKDKPIVDTMEFGTNVCQLPGGRGGRFKSPKLEELSEKLFGHKFDEAHNAAADVNATAQ
AFFEMMRLEVYPLDKIFFDDVQMKAFKDHNPDVFKPFDIVIRRQVADSKKRKKTVDFGDT
DDIDIGNFFHFYSHSIYSTLQATSGLADLVSVAEKNNFPAVGLVDLGNMMGAFKFIDEVE
KYNGNLKQKKQEAEAAEEKPDNYDEINSAKFLTPILGLELYISERYQQRQFTKDDPDRRT
QVVLLAKNFEGYKNLAKLSSIGFKEGFYAGVPRISRALISQYKDNLIALTGGLSCEVPST
ILELGEQRGEEVFQWWLNEFGDDFYIQIQNHQMDEEDYVNEILLKFADKYNVKILAQNET
YYTRKSDAKIQDIVACIKDGEKLSTPVGKGFGKRKGLNSEQFYLKNSEEVKLAFQMYPDA
FMAYDEFLNKFESYKLKRDVLLPKFDIPEEFQDAEDLNDGGKRGEMNFLRHLTYEGARKK
YEEITDEIRERLDFELDIIAKTGYPGYFLIVQDFCNEAKNMGVSVGPGRGSAAGSAVAYC
IGITNVDPIKYDLLFERFLNPERISMPDIDIDFDDEGRDRIIKWVIDKYGQNQVAQIITY
SVLGGKSAIKDAGRVLDVSIPETNNIAKLIPNTPGMNIAKVMKSDLKKFKPEDLPLVDEI
KGILNNPDDGRFNVLDSAYKMEGCIRNTGIHACGVIITPEDISNLVPVTIAAKDADILVS
QFDNSVAESAGLLKMDFLGLRTLTIIKDAVKLIKNRHGIEIIPDDIPLDDAKTYQLFKEG
RTIGIFQYESAGMQKYMRELKPTVFADLIAMNALYRPGPIKYIPNFINRKHGLEEIIYDL
PETQEYLQETYGITVYQEQVMLLSQKLANFTKGEADTLRKAMGKKQKAVLDKMFPKFIEG
GKKNNLDEEKLHKIWKDWEAFAEYAFNKSHSTCYAYIAYHTAYLKANYPAEYMASVMSNN
INNTKQITLFMEDCQAMGVDVLGPSVNESEYEFAVNEKGQIRFGLGAIKGIGEGPSEAIC
KEREKSGRFTDIYSFFERIPSSQLNKRVVESLVFAGAFDELDSYHRAQYFDVDTAGRTNI
ERLLRYSSSFQDSKNSVENSLFADFADEVQIERPKINPAPEWQNMHKLNREKEAIGFYLS
AHPLDEFYYQYKFIQGALSKKSVVSKKLDEELEKAPENEKADEQDDKDEVSTDIDFPADM
LEVDGDEMIEEVIKKVDPRGKFNFLNLDEVDPYRDFVLQRDFSNLTPAEISKLKEKKFRS
KGNDNSKEYMVSGLITEYVIRDGYESGTKIAFITLEDYTGSYSFRLNDKDYMRLREKLGE
HRFVIFKIKFAPSKDFDRLYVNVTEVIDLKEAFDRYASQLSLVVPFNEVDQDDIEFFRRT
FAHNKGVHKLSFYLKDPVENHFVELNSMQTSVDINAETIKLLHEYKKYELFLN
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgatttttgatacagaaacaactggtttaccccgaaattttaatgctccttta
actgacttcgacaactggccgcgcatggttcagattgcatggcagttacacgacgagcat
ggaaatcttatagagaatcaggattatattataaagcccgaaggctacgatattccgttt
aacgcataccgtattcacgggatatctacagagatggcgatgcgtgaaggtcgcgatctt
aaagaggtacttaatgaatttaaggaagtactgaaaaaaacaaaggtagtagcagggcac
aatgtgagctttgactacagtattgttggatctgagtttcttcggaaagagctggaagat
aatctgaaagataaacctatcgtagatacgatggagtttggtaccaatgtttgtcagctt
ccggggggtagaggtggtagattcaaatctcctaaactggaagaactttccgaaaagtta
ttcggacacaaattcgatgaagcccacaatgcagctgccgacgtaaacgctacggcacag
gcattctttgaaatgatgagactggaagtttatccattggataaaatcttcttcgatgat
gtacagatgaaggctttcaaggatcataatcctgatgtcttcaaacctttcgatattgta
atccgcagacaggttgccgattccaaaaaaaggaaaaaaactgttgactttggagataca
gacgatattgatattggaaacttcttccatttttatagtcacagtatttattccacttta
caggcaacatccggtttggctgatttagtttccgtagcggaaaagaataactttccggcg
gtaggtcttgtagatcttgggaacatgatgggggcttttaagtttatcgatgaggttgag
aaatataacggaaatcttaagcagaaaaagcaggaagcagaagccgctgaggaaaagcca
gacaactatgatgaaattaacagtgctaaatttcttacgcctattttaggtttagaactt
tatatctctgaacgttatcaacaaagacagtttaccaaagatgatccggacagaagaact
caggttgtactcttagctaaaaactttgaaggttataaaaatctggcaaaactttcttct
ataggttttaaagaaggtttttatgccggagttccaaggattagccgtgcactgatttca
caatataaagacaatcttattgcattgacaggaggtttgtcctgtgaggttccttctaca
attctggaattgggggagcaaagaggagaagaagttttccaatggtggctgaatgaattt
ggtgatgatttctacatacaaattcagaatcatcagatggatgaggaagattatgttaat
gaaatccttctcaaatttgcagataaatataacgtcaaaatactggcacagaacgaaact
tattatacccgaaaatcggatgccaaaatccaggatattgtagcctgtattaaggatggt
gaaaagctgtcgacaccagtaggcaaaggattcggaaaaaggaaaggactgaatagtgag
cagttttatctgaagaatagtgaagaagttaagctggcttttcagatgtatccggatgct
ttcatggcttacgatgagttcctgaataagtttgaatcttataagctaaaaagggatgtt
ctcctgcctaagtttgatattcctgaggaatttcaggatgctgaagacctgaatgatggt
gggaagaggggagagatgaatttcctgagacatcttacctatgaaggcgcaaggaaaaaa
tatgaagaaattaccgatgaaataagagaaagactggattttgaactggatattattgct
aaaacagggtatccgggatatttcctaattgtacaggatttctgtaacgaagccaaaaat
atgggtgtttcggtaggcccgggaaggggatccgcagccggatccgcagtcgcctactgt
ataggaattactaatgtagaccctattaagtatgatctcctttttgagcgttttcttaac
cctgaaaggatttcgatgcccgatatcgatatcgactttgacgatgaaggacgtgacagg
attattaagtgggtaattgataaatacggacaaaatcaggtagcacagattattacctac
tctgtattgggaggtaaatcggctattaaagatgcgggaagggtactggatgtatctatt
cccgaaaccaacaatattgcaaagctaattccgaatacaccagggatgaacattgcaaaa
gtaatgaagtccgatctgaagaaattcaaaccagaagatcttccgctggttgatgaaata
aaaggaattctgaataacccggatgatggtcgtttcaatgtactggacagtgcttataaa
atggaaggctgtatccgaaacacaggtatccatgcttgtggggtaattattacaccagaa
gatatcagtaatctggttccggtgacaattgctgcaaaagatgcagatattttggtatct
cagtttgataactcggtggcggaaagtgccggattgctgaaaatggactttttgggactc
agaacgcttaccattattaaagatgctgtaaagctcattaagaacagacacggaatagaa
attattccggatgatataccattggatgatgcgaagacttatcaactctttaaagaggga
cgtacgattggtatattccagtatgaatctgccggtatgcaaaaatacatgcgtgagctg
aagcctacggtatttgcagatcttattgcaatgaatgcattgtaccgtccgggacctatt
aaatatattccaaactttatcaatcgtaaacacggtctggaggaaatcatatatgatctt
ccggaaacacaggaatatcttcaggaaacctatggaattacagtatatcaggagcaggta
atgctactgtctcagaagctggctaactttaccaaaggtgaggccgatacgctgagaaaa
gcaatgggtaaaaagcaaaaagcggtactggataaaatgttcccaaaatttattgaagga
ggaaagaaaaataatctggacgaagagaagcttcataaaatctggaaagactgggaagca
tttgctgaatatgcatttaacaaatctcactcaacatgttatgcttatattgcttaccac
acggcctatttgaaggccaattatccggctgagtatatggcgagtgtaatgagtaataac
attaacaataccaagcagattacattgttcatggaagattgccaggcaatgggagtggat
gttttgggaccatctgttaatgaatctgaatatgagtttgctgtaaacgagaaaggtcag
atacgttttgggcttggtgctataaaaggaataggagaaggaccatcggaagctatttgt
aaagaaagagaaaaaagcgggcgatttacagatatttacagcttttttgaaagaattcct
tcatcacaactaaataaaagagtagtggaaagcttggtgtttgccggagctttcgacgaa
ttagattcttatcaccgtgctcagtattttgatgttgatacagcgggaaggacgaatatt
gaacgtttactaagatacagcagcagttttcaggatagtaaaaattcggtagagaattct
ctgtttgcagattttgcagatgaggttcagattgaaagaccaaaaataaatccggctcct
gagtggcagaatatgcataaacttaacagggagaaggaggctataggtttctatctttct
gcgcatccgttggatgaattctattatcagtataagtttattcagggagcactgagtaaa
aaatcggtggttagcaaaaagctggatgaagaactggaaaaagcccctgaaaatgaaaaa
gcagatgagcaggatgataaggatgaagtgtctacagatatcgatttccctgcagacatg
ctggaggtagacggagatgagatgattgaagaggttataaaaaaagtagatccaagaggg
aaatttaatttcctgaatctggatgaggtagacccttacagggattttgtacttcaaagg
gatttttccaatcttacaccggcagagatttcaaagctaaaagagaaaaaattccgaagt
aaagggaatgataattccaaagaatatatggtctccggtcttattacggaatatgtaata
cgagacggttacgaaagcggaacaaagattgcctttattacactggaagattatacaggt
tcttattctttcaggctgaatgataaagattatatgcgtttgagagaaaagcttggagag
cacagatttgtgatttttaagatcaaatttgcaccttccaaagattttgacaggttatat
gtaaatgttactgaagttattgacctgaaagaagcttttgatcgctatgccagtcaactt
tcattagtggtaccgtttaatgaagtggatcaggatgatatagagtttttcagacgcact
tttgcccacaataaaggggtacacaaactaagtttctatctgaaagatcctgtagaaaat
cactttgtagaactcaattcaatgcagacttcagtagatataaatgctgagacgataaag
cttctgcacgaatataagaaatatgaattattcttaaattaa
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