Elizabethkingia anophelis JM-87: BBD30_18555
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Entry
BBD30_18555 CDS
T04743
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
een
Elizabethkingia anophelis JM-87
Pathway
een03030
DNA replication
een03410
Base excision repair
een03420
Nucleotide excision repair
een03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
een00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBD30_18555
03410 Base excision repair
BBD30_18555
03420 Nucleotide excision repair
BBD30_18555
03440 Homologous recombination
BBD30_18555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
een03032
]
BBD30_18555
03400 DNA repair and recombination proteins [BR:
een03400
]
BBD30_18555
Enzymes [BR:
een01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBD30_18555
DNA replication proteins [BR:
een03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BBD30_18555
DNA repair and recombination proteins [BR:
een03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BBD30_18555
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBD30_18555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
RNase_H_2
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AQW96028
LinkDB
All DBs
Position
complement(4088848..4091664)
Genome browser
AA seq
938 aa
AA seq
DB search
MDATQDKRLFLIDAYAMIFRGYYALIRSPRLTSKGMNTSAIFGFTNSLIELIKREKPTHL
AVVFDVGGKTLRHDDFEEYKANRSETPEAIKIAVPYIHQILEAMHIPILGVEGYEADDVI
GTLSYKAEKEGYNVYMVTPDKDFAQLVTDHVKIYKPGMKGGDIEILGVEEVKAKYEIQDP
KQIIDFLAMMGDSVDNIPGLEGVGEKTAKKFLQDYGSIENLLANTADLKGKLKEKVEASA
ERGILSKKLATIMTDAPIDFHQEQYDLEAPDFEKVKEIFEELEFRRLYENMYRAFAPKGE
PVQAAAEETVKKVSPQAEQLNLFSSFDELDAATSSKKDIKTNDHLYQYVDSPKALSVLVR
NLLEKPALAFDTETTSLNELEAQLIGVSFSYKKGLAYYIPMPEDKQEAQVLLDIMRPVFE
KEDQIKIAHNLKFDYKVLHQQGVEVKGKLFDTMIAHYLLSPDGRHGMDYLSEMYLDYIPV
SIETLIGKKGKKQGTLRDVSVAEQTAYAAEDADVTFQLYELFAPQLKSENLEKLFTEVEM
PLVNVLARMELAGVSLDKGWLAQESVDLESDLKKLEQEIFELSGEEFNMNSPRQLGDILF
EKMQLDPKAKKTKTGQYATSEDILQKLASKHEIIKHILEYRQLQKLKSTYVDALPTQIDA
FDNRVHTNFSQTTAATGRLASVNPNLQNIPIRTLRGQQIRGAFVAGEGKKLISADYSQIE
LRLIAEISGENNMLEAFNQGADIHASTAAKLFKIPIEEVSKIQRSQAKTVNFGIIYGQGA
FALAEQTGLSRSEAKAMIDAYYETYPRLREYMDEQVKKARDLGYVETILGRKRHLTDINS
NNFVVRGHAERNAVNAPIQGSAADIIKLAMIRIDQQLDEKKMNTKMLLQVHDELVFESPI
SEIEKASKLIKTEMESAYPTKVPLVVEVGVGDNWLEAH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaacacaagacaaaaggctctttcttattgatgcctacgcaatgattttccgt
ggatattatgctttaatcagaagcccgagattaaccagtaaggggatgaacacctctgca
atctttggatttacaaattcattaatagagcttataaaaagagaaaagccaacacatctt
gctgttgtatttgatgtaggtggtaaaaccctgcgtcatgatgactttgaagaatacaaa
gccaatcgttccgaaacaccggaagctattaaaatagcagttccgtatattcatcagatt
ctggaagctatgcatattcctattcttggggtagaaggttatgaagccgatgatgttatt
ggtacactttcttataaagcagagaaagaaggctataatgtatacatggtaacaccggac
aaggattttgcccagctcgtaacagatcatgtgaaaatatacaaacccggaatgaagggt
ggagatatcgaaatcctaggtgtagaagaggtgaaagcgaaatatgaaattcaggatcct
aaacagatcatcgatttcttagcaatgatgggggatagtgtagacaatatcccggggttg
gaaggcgttggtgaaaaaacagctaaaaagttcctgcaggattatggaagtatagaaaat
cttttggcgaatacagctgatctgaaaggaaagctgaaagaaaaagtagaagcaagtgcg
gagagaggtatactttctaaaaaactagcgactattatgacggatgcaccaatagatttt
catcaggagcaatacgatctggaagcaccggattttgaaaaagtaaaagaaatatttgaa
gaactggagttccgtagattatacgaaaatatgtaccgtgcttttgctccaaaaggagaa
ccagtacaggcagcggctgaagaaaccgtaaaaaaagtttcgccacaagcagagcagctt
aatctattctcaagttttgatgaactggacgctgcaacttcttccaaaaaagatattaaa
accaatgatcatttgtaccagtatgtagattcgccaaaagcgctttcggtattggtgaga
aatcttttggaaaaacctgcattagcttttgatacagaaactacttctttgaatgagtta
gaagcacagctaattggcgtttctttctcttacaaaaaaggtttagcttattatatcccg
atgccagaagataagcaggaagcacaagttcttctggatattatgcgtccggtttttgag
aaagaagaccagataaagattgcgcataatctgaagttcgactataaagtgcttcaccag
caaggtgttgaggtaaaggggaaactttttgatacaatgattgcacattacctgctaagt
ccggacggacgtcatggtatggattatctgtccgaaatgtatctggattatatcccggtt
tctattgaaactctaatcgggaaaaaagggaaaaaacaaggtacattaagagatgtgagc
gttgctgaacaaacagcttatgcagcagaagatgcggatgttaccttccagctatatgag
ttgtttgctccacaattgaaatctgaaaacttagagaagctttttactgaagtagaaatg
cctttggtaaatgttctagcgcgtatggaactagccggagtatcattagataaaggttgg
ctggcacaggaaagtgtagatttggaaagtgaccttaagaaactagaacaggaaatattt
gaactttcaggtgaagaatttaatatgaactctccacgtcagttaggggatattttgttt
gagaaaatgcaacttgatccaaaggctaagaaaaccaaaaccggacaatatgcaacttct
gaagatatcctgcaaaagctagcttctaagcatgaaataattaagcatatattagaatac
cgtcagttacagaaactgaaatctacctatgtagatgctttacctacacagattgatgct
tttgacaacagagtacataccaacttttcacaaactactgctgctacaggacgtttagca
agtgttaatccaaaccttcagaatattccgatccgtacacttcgagggcaacaaattcgt
ggagctttcgtcgcaggagaagggaagaagttaatctctgccgattattctcagatagag
ttgagattaattgctgaaataagtggtgaaaataatatgctggaagcctttaatcaggga
gcggatattcatgcttctacggctgctaaactatttaaaatcccaattgaagaagtttct
aaaatacaaagaagtcaggcaaagactgtaaatttcggaattatatatggtcagggagct
tttgctttagcagaacaaacgggactttcccgctcagaagcaaaagcaatgatagatgct
tattatgagacttatccgagacttcgagagtatatggatgagcaggtcaagaaagcacgc
gatttaggttatgtagaaaccattttaggcagaaagcgtcaccttaccgatatcaactct
aataattttgttgtacgtggtcatgcagagcgtaatgctgtaaatgcaccaatacaggga
agtgctgctgatattataaaactggcaatgatcagaatagatcaacagttggacgaaaag
aaaatgaataccaaaatgcttcttcaggtacatgacgaattggtgtttgaatctccgata
agtgagattgaaaaagcatcgaagcttatcaaaaccgaaatggaaagtgcatatcctaca
aaagtgccgttggtggttgaggttggagtgggagataactggctggaagcacactaa
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