KEGG   Enterobacteriaceae endosymbiont of Plateumaris pusilla: GJT83_01705
Entry
GJT83_01705       CDS       T07640                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
eep  Enterobacteriaceae endosymbiont of Plateumaris pusilla
Pathway
eep03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:eep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GJT83_01705 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eep03021]
    GJT83_01705 (rpoC)
   03400 DNA repair and recombination proteins [BR:eep03400]
    GJT83_01705 (rpoC)
Enzymes [BR:eep01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GJT83_01705 (rpoC)
Transcription machinery [BR:eep03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     GJT83_01705 (rpoC)
DNA repair and recombination proteins [BR:eep03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      GJT83_01705 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: QJC29612
UniProt: A0A6H2F616
LinkDB
Position
complement(355062..359258)
AA seq 1398 aa
MKDLFKILKSPNIIEEFDAIKISLASSDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLNMPLKDIERVLYFESYVVVEEGITKLNKRQILTEEQYLDTLEEFGDEFNAKM
GAEAIEYLLKNINLEEECEFLRNELYNTNSETKRKKITKRIKLLESFIHSGNKPEWMIMN
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELSAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAIIGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LHLNQCGLPKKMALELFKPFIYGKLEMQGLATTIKSAKKMVEKEESVVWDVLEEVIREHP
ILLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAYNADFDGDQMAVHIPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRERINAKGEDMILSNSKEAEKVYRTG
QGDLHARVKVRITEYYKNKNNEWIKNKNIVNTTIGRAIFWMHVPKGLPYKIINKTLGKKS
ISKMLNICYRILGLKPTVIFADKIMYTGFYYAARSGSSVGIDDIIIPKKKSTIILEAESE
VSEIQEQFQSGLVTSGERYNKVIDIWSVANEKVAQAMMKNLSTENVINKKGIIEKQISFN
NIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVITENDCLTKNGIEISPIIEGGDVKESLRERVL
GRVTAKDIFKPGKKDVLIPRNTLLNEKYCDILDQYSIDNIIVRSVVSCETNFGVCANCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRVASESSIQIKDKGTIKL
TNMKSVINSDGKLVITSRNVKLKIIDKFGRIKEKYKIPYGAIITKKNGENINSGEIIAYW
DPHTMPIISEVNGKVKFIDMLDGQTVIRQNDELTGLSSIVVLDTSERTSIGKDLRPMLKI
VNFKNEDILIPGTDIPAHYFLPSKTIVHLENGIKIHAGDIIARIPQESGGTKDITGGLPR
VADLFEARRPKESAILAEISGIISFGKETKGKRRIIINPINNENTYEEMIPKWRQINVFE
GELVNKGDIISDGSESPHDILRLKGVNEVTNYIINEVQEVYRLQGVKINDKHIEVIIRQM
LRKATIKNRGDSNFLDGEQVEVSQIKIINKKLKEKGKKIVLYTHDLLGITKASLATASFI
SAASFQETTRVLTEASVAGKFDELRGLKENVIVGRLIPAGTGYSYHKSRIKKRKNNVTAT
ASASANLTELLNANLNKK
NT seq 4197 nt   +upstreamnt  +downstreamnt
gtgaaagatttatttaagattttaaaatcaccaaatataatagaagaatttgatgcaata
aaaatttctttagcttcttctgatatgattagatcttggtcttttggagaagtaaaaaaa
ccagaaacaattaattatcgtacttttaaaccagaaagagatggtttattttgtgctcgt
atttttgggccagtaaaagattatgagtgtttatgtggaaaatataaaagattaaaacat
cgtggtgtaatatgtgaaaaatgtggtgtagaagttacacaaactaaagttagacgtgaa
agaatgggacatattgaactcgcatctcctactgcacatatatggtttttaaaatcatta
ccttctagaataggattacttttaaatatgccattaaaagatattgaaagagtattatac
tttgaatcctatgttgttgtagaagaaggtataacaaaattaaataaaagacaaatttta
acagaagaacaatacttagatacattagaagaatttggagatgaatttaatgcaaaaatg
ggagcagaagctattgaatatttgttaaaaaatattaatttagaagaagaatgtgaattt
ttacgtaatgaattatataatactaattctgaaactaaaagaaaaaaaattactaaacgt
atcaaattacttgaatcatttattcattcgggaaataaaccagaatggatgataatgaat
gtattaccagttttacctcctgatttaagacctttagttccattggatggaggaagattt
gctacttctgatttaaatgatttataccgtcgtgttattaatcgtaataatagattaaaa
cgtttattagaattatcagcacctgatattatagtaagaaatgaaaaacgtatgttacaa
gaagctgtagatgctcttttagataatggaagaagaggaagagcaataataggatctaat
aagagacctttaaaatcattagcagatatgataaaaggaaaacaaggaagatttagacaa
aatttattaggaaaaagagtagattattcaggaagatctgttattacagtaggaccttat
ttacatttaaatcaatgtggtttgcctaaaaaaatggctttagaactatttaaaccattt
atatatggaaaattagaaatgcaaggattagcaacaacaattaaatctgcaaaaaaaatg
gttgaaaaagaagaatctgtagtttgggatgttttagaagaagttataagagaacatcca
atattattaaatcgtgcaccaactttacatagattaggaatacaagcttttgaaccaata
ttaattgaaggaaaagcaatacaactacatcctcttgtatgtgcggcttataatgctgat
tttgatggagatcaaatggccgtacacattcctttaactttagaagcacaattagaagct
agagctcttatgatgtctactaataatattttatcaccagctaatggtgaacctattatt
gttccgtcgcaagatgtagttttaggattatattatatgacgagagaaaggattaatgct
aaaggagaagatatgatattatctaattctaaagaagcagaaaaagtatatcgtacagga
caaggagatttacatgcacgtgttaaagtaaggataactgaatattataaaaataaaaat
aatgaatggataaaaaataaaaatattgttaatactacaataggtagagcaatattttgg
atgcatgtaccaaaaggtttaccttataagataataaataaaactttaggtaaaaaatca
atttctaaaatgttaaatatatgttatagaattttaggattaaaacctacagttattttt
gcagataaaatcatgtatactggattttattatgcagctagatcaggttcttctgtaggt
atcgatgatattattattcctaaaaaaaaatctacaataatattagaagcagaatctgaa
gtttctgaaatacaagaacaatttcaatcaggattagttacttcaggagaaagatataat
aaagtcattgatatttggtcagtagcaaatgaaaaagttgcacaagcaatgatgaaaaat
ttatctacagaaaatgtaataaataaaaaaggaataatagaaaaacaaatttcttttaat
aatattttcatgatggcagattctggtgcccgaggttcagcagctcagattagacaatta
gctggtatgagaggattaatggctaaacctgacggatctattattgaaactccaataaca
gctaattttagagaaggattaaatgtattacaatattttatatctactcatggagcaaga
aaaggattagcagatactgctttaaaaacagcaaattcaggttatttaactcgtagatta
gttgatgttgctcaagatttagtaataacagaaaatgattgtttaactaaaaatggtatt
gaaatatcccctataattgaaggtggagatgtaaaagaatctcttagagaaagagtttta
ggaagagtaactgcaaaagatatctttaaaccaggtaaaaaggatgttttaattcctaga
aatacattattaaatgaaaaatattgtgatatattggatcaatattctattgataatatt
atagttagatctgtagtaagttgtgaaactaattttggtgtatgtgctaattgttatggt
cgtgatttagcaagaggacatattattaataaaggagaggcaattggagtaattgcagca
caatctataggagaacctggaacacaattaactatgagaacatttcatataggtggagca
gcttctagagttgcatctgaatctagtatacaaataaaagataagggaactataaaacta
acaaatatgaaatcagttattaattctgatggtaaattagttattacttcaagaaatgtt
aaattaaaaattatagataaatttggacgtataaaagaaaaatataaaataccatatgga
gcaattataacaaaaaaaaatggagaaaacattaattcaggagaaataattgcttattgg
gatccacatacaatgcctataattagtgaagttaatggaaaggtaaaatttattgatatg
ttagatggtcaaactgttattcgtcaaaatgatgaattaacaggtttatcttctattgta
gtattagatacatctgaaagaacttcaataggaaaagatttaagacctatgttaaaaatt
gtaaattttaaaaatgaagatattctaattcccggaactgatattcctgctcattatttt
ttacctagtaaaactatagttcatttagaaaatggaattaaaattcatgcaggagatatt
atagcaagaataccacaagaatcaggaggtactaaagatataactggaggattacctaga
gtagcagatttatttgaagctcgtcgtccaaaagaatcagctattttagctgaaattagt
ggtataatttcttttggtaaagaaactaaaggaaaaagacggataataattaatcctatt
aataatgaaaatacatatgaagaaatgataccaaaatggagacaaataaatgtatttgaa
ggagagttagtaaataaaggagatattatttctgatggttctgaatctccacatgatata
ttgcgtttgaaaggtgtgaatgaagtaacaaattacataattaatgaagttcaagaagta
tatcgtttacaaggagtaaaaataaatgataaacatattgaagttataatccgacaaatg
ttacgtaaagcaacaattaaaaatagaggtgattctaattttttagacggagaacaagtt
gaagtatctcaaataaaaataataaataaaaaattaaaagaaaaagggaaaaaaatagta
ttgtatactcatgatttattaggtattactaaagcatctttagcaacagcatcttttatt
tctgcagcttcttttcaagaaactacaagagtattaacagaagcttctgttgcaggaaaa
tttgatgaattaagaggtttaaaagaaaatgttattgtgggtagattaattccagctggt
accggatattcttatcataaaagtcgtattaaaaaaagaaaaaataatgttactgcaaca
gcatctgcatctgcaaatttaactgaattattaaatgcaaatttaaataaaaaataa

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