Entomospira entomophila: PVA45_02045
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Entry
PVA45_02045 CDS
T10561
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
eet Entomospira entomophila
Pathway
eet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVA45_02045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eet03019
]
PVA45_02045
Enzymes [BR:
eet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVA45_02045
Messenger RNA biogenesis [BR:
eet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PVA45_02045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
OrgA_MxiK
AAA_22
Mnd1
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
WDI35853
LinkDB
All DBs
Position
427622..429334
Genome browser
AA seq
570 aa
AA seq
DB search
MQFSQFPLDPRLLRGLDLAQYVTCTPVQEATLQAVLEHGKDVYAQSQTGTGKTAAFLIAT
FWHLLKPENHDKFALILAPTRELVVQIEKEARTLGQFLKFPMAAIYGGVSIERQRQSLLR
KPRIIVATPGRLQDFINQQTISLKNAGVLVIDEADRLFDMGFHKDLLRIVKMLPAPQQRL
NLLFSATLNNKVGQLAWEHMNNPESIVIKSEYPTVEGISQHLFHVSRSEKMILLLAVLKK
ENPESAIIFSNTKAGARQISLRLQRAGYNCALIEGNIPQKKRLDIIAKMKAGKIKFLAAT
DVASRGIHIPNLSLVINFDLPDDAENYVHRIGRTARGTQTTGKAISFACERFVYNLSSIE
KLIKKKISVTIIDDALKQIIDDILKENPDQGAISEKTMSGTPQKSSQQGKAYTRKPHGDR
RNQDKRHDHDRRQPATGGSKSTGSKYPPRSPREENNHTPRQGYQGRTHSSTSSQRDYKRP
NSQERPSGQNSRRESHEPQQRAPRTASTHSHQRQQRANTASRGDVPSKHARSTEASRSRG
EQSHGTHDANSQKQKNILNFISKLFNKEGE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttcacagtttcctctcgatcctcgcctcttacgtgggctggatctcgcacag
tacgtcacatgtactcccgtgcaagaagcaacccttcaagctgtcttagaacatggtaaa
gatgtttacgcccaaagtcaaaccggcacaggtaagacagccgcctttttgattgccact
ttttggcatctattaaaaccggagaatcatgacaaatttgccctgattctcgctccaaca
cgtgagcttgttgttcaaattgaaaaagaagctagaacactaggtcaattccttaaattc
cccatggcagctatctatggcggtgtatccattgagcgacaacgccagtctctcttgcgc
aaaccaagaattatcgttgccaccccaggacgattacaggattttatcaaccaacagaca
atatccctcaaaaatgccggtgttctcgttattgatgaagccgatcgcctctttgatatg
ggtttccacaaagatcttttgcgcattgtcaaaatgctgcctgcaccacaacagcgtctc
aatttgctcttcagtgcaacgctcaacaataaggttggtcaacttgcttgggagcacatg
aataatccagaaagcattgtcattaagtccgaatatcccaccgttgaagggattagccaa
catcttttccatgtcagtcgcagtgaaaaaatgatcctcctcttagctgttctcaagaaa
gagaacccagagagtgccattatttttagtaatacaaaggccggagctagacaaatatca
ctgcgacttcaacgagctggttataattgcgcactcattgaaggcaatattcctcaaaaa
aaacgactcgacattatcgctaaaatgaaagctggaaaaattaaattccttgcagctacc
gacgtcgcatctcgtggtatccacattccaaacctctccttagtcattaacttcgacctc
cccgatgatgctgaaaactatgttcatcgcattggtagaactgcccgtggaacacagaca
actggtaaggcgatcagcttcgcctgtgaacgctttgtctataatttgtcatctatcgag
aagcttatcaagaaaaaaatctctgtgacaatcattgatgacgccctcaaacaaattatc
gatgatatccttaaagagaatcctgatcaaggtgccatcagcgagaagaccatgtctgga
acaccgcaaaagtcgtcacagcaaggtaaagcctatactcgtaaaccccacggagacagg
cgcaatcaagataaacgtcatgatcatgatagaagacaaccggcgacaggtggctctaaa
agtaccggaagtaaatatccacctcgctcacctagagaggaaaataatcatactccccgt
cagggttatcagggaagaactcatagctccactagtagtcagcgtgactacaagcgcccg
aattctcaagaacgcccatcagggcaaaattcccgcagagagagtcatgaaccacagcaa
cgtgcaccccgaacagcaagcactcactcccatcaacgacagcaacgagcaaatactgca
tcacgaggtgatgtaccctcaaaacatgcaagatcaaccgaagcatcacgaagtcgagga
gaacagagtcatggtactcatgatgcaaactcccagaagcagaagaatatcctcaacttt
atttcgaagctattcaataaagagggtgaatag
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