Endosymbiont of Euscepes postfasciatus: NAREPO1_00240
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Entry
NAREPO1_00240 CDS
T07679
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
eeu
Endosymbiont of Euscepes postfasciatus
Pathway
eeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NAREPO1_00240 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eeu03021
]
NAREPO1_00240 (rho)
03019 Messenger RNA biogenesis [BR:
eeu03019
]
NAREPO1_00240 (rho)
Transcription machinery [BR:
eeu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NAREPO1_00240 (rho)
Messenger RNA biogenesis [BR:
eeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NAREPO1_00240 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_14
S1CSD-TOTE-2
OB_RNB
Mor
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BBA84561
LinkDB
All DBs
Position
complement(29549..30811)
Genome browser
AA seq
420 aa
AA seq
DB search
MNLTDLKNIDISELINLGEKFSIENISRMHKREIIFQILKYYANKGDDIFGDGVLDILQD
GFGFLRSINNSYLAGPDDIYVSPSQIRKFNLRIGDTISGKIRPPKEGEKYFALLKIDEIN
FNKLENYKNKILFENLTPLHANSRLIMEIGDGSIEDLTTRILDISSPIGRGQRGLIVAPP
KAGKTILLQSIAKSISINYPDCILIILLIDERPEEVTEMQNKISYKNVIYSTFDEPAYKH
VQVAEIIIERAKRLVENKKDVIILLDSITRLTRAYNIILPSSGKILTGGIDSNALNRPKR
FFGSARNTKEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKISERRIFPAID
YNKSGTRKEELLINYNDLQKMWILRKVMYPMNEIESMEFLINKLSMTKTNNDFFEMMKKS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaacggatttaaaaaatatagatatttctgaattaataaatttgggagaaaaa
ttttctattgaaaatatttcaagaatgcataaaagagaaataattttccaaatattaaaa
tattatgctaataaaggagatgacatatttggagatggtgttttagatattttacaagat
ggatttggttttttaagatctataaataattcatatttagcaggtccagatgatatatat
gtttctccaagtcaaataagaaaatttaatttaagaataggagatactatttctggtaaa
ataagaccacctaaagaaggagaaaaatattttgcgttattaaaaatagatgaaataaac
tttaataaacttgaaaattataaaaataaaatattatttgaaaatttaactccattacat
gctaattctagattaataatggaaattggtgatggttcaatagaagatttaactacaaga
atattagatatatcttctcctataggaagaggtcaaagaggattaatagtagctcctcct
aaagctggtaaaactattttattacaaagtattgctaaaagtatatctataaattatcct
gattgtatattaataatattattaatagatgaaaggcctgaagaagttactgagatgcaa
aataaaatatcatataaaaatgttatttattctacttttgatgaaccagcgtataaacat
gtacaagttgcagaaataattatagaaagagctaaaaggttagttgaaaataaaaaagat
gttattattttattggattctataactagattaacaagagcgtataatataatattacca
tcatcaggaaaaatattaactggtggtattgattcaaatgctttaaatagaccaaaaaga
ttttttggttcagctagaaatacaaaagaaggaggaagtttaacgataatagctacagca
ttagtagatactggatctaaaatggatgaagtaatatatgaagaatttaaaggaactgga
aatatggaacttcatttatcaagaaaaatatctgaaagaagaatatttcctgcaatagat
tataataaatctggtaccagaaaagaggaattattaataaattataatgatcttcaaaaa
atgtggatattaagaaaagttatgtatccaatgaatgaaatagaatctatggaattttta
ataaataaattatctatgacaaaaactaataatgatttttttgaaatgatgaaaaaatca
taa
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