Eikenella exigua: EZJ17_02550
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Entry
EZJ17_02550 CDS
T06211
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
eex
Eikenella exigua
Pathway
eex00521
Streptomycin biosynthesis
eex00523
Polyketide sugar unit biosynthesis
eex00525
Acarbose and validamycin biosynthesis
eex00541
Biosynthesis of various nucleotide sugars
eex01100
Metabolic pathways
eex01110
Biosynthesis of secondary metabolites
eex01250
Biosynthesis of nucleotide sugars
Module
eex_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
eex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EZJ17_02550 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EZJ17_02550 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EZJ17_02550 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EZJ17_02550 (rfbB)
00525 Acarbose and validamycin biosynthesis
EZJ17_02550 (rfbB)
Enzymes [BR:
eex01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EZJ17_02550 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Sacchrp_dh_NADP
KR
DUF6641
Motif
Other DBs
NCBI-ProteinID:
QED91642
UniProt:
A0AAE6INM7
LinkDB
All DBs
Position
complement(483392..484462)
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AA seq
356 aa
AA seq
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MHLLITGGAGFIGSAVIRHIIRHTRDSVINLDKLTYAGNLESLAEVSGSPRYTFEQIDIC
NRTELDHVFAQYQPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEAARAYWQRLPE
NRRSVFRFHHISTDEVYGDLHGTDNLFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLP
TIITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLFVEDHARALYQVIT
QGKIGESYNIGGHNEKTNLEVVQTICTLLEELAPEKPVGVSRYTDLITFVPDRPGHDLRY
AIDAAKIGRELSWQPQETFESGMRKTVQWYLDNKIWWQRILDGRYRLERLGHLSTP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcctcatcaccggcggtgccggctttatcggctcggcagttatccgccatatc
atccgtcacactcgagattctgttatcaacctcgacaagctcacctacgcaggcaacctc
gaatccttggcagaagtttcaggtagcccccgttatacctttgagcaaattgatatttgc
aaccgtaccgagctcgaccacgtatttgcccaatatcagcccgacgcggtgatgcacctg
gcagcagaaagccatgtggataggagcatagacagtgctggtgaatttatccaaaccaat
attgtcggcacctttaacctgcttgaagctgcccgtgcctattggcaaaggctacctgaa
aaccgtcgctcagtattccgtttccatcatatctccaccgatgaggtgtatggcgacctg
catggcacggataatctattcaccgaaaccacgccctacgccccgtctagcccctattcc
gccagcaaagcctccagcgaccatcttgtacgcgcctggcagcgcacctacggcctgccc
accatcatcaccaactgttccaacaactacggcccctaccacttccctgaaaaactcatt
ccgctgatgattctgaatgccctagccggtaaaccattgcctgtttacggcaacggacag
caaatccgcgattggctctttgtggaagaccatgcccgcgcgctgtatcaagtcattacc
caaggcaaaatcggcgagagctacaatatcggcggccacaacgagaaaaccaatctcgaa
gtagtacaaactatctgtaccttactggaagaactggcgcccgaaaaacccgttggcgtg
tcgcgttataccgacctaattacctttgtgcccgaccgcccaggccatgacctgcgctat
gccatcgatgccgccaaaatcggccgcgagctgagctggcagccacaggaaacctttgaa
tccggtatgcgcaaaaccgtacaatggtacctggataacaaaatttggtggcaacgcatc
ctcgatggtcgttaccgtttagagcggcttggccacttatcaaccccataa
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