Eikenella exigua: EZJ17_06720
Help
Entry
EZJ17_06720 CDS
T06211
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
eex
Eikenella exigua
Pathway
eex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EZJ17_06720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eex03019
]
EZJ17_06720
Enzymes [BR:
eex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EZJ17_06720
Messenger RNA biogenesis [BR:
eex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EZJ17_06720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
ERCC3_RAD25_C
AAA_22
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
QED92333
UniProt:
A0AAX1F995
LinkDB
All DBs
Position
1292146..1293537
Genome browser
AA seq
463 aa
AA seq
DB search
MNNPFTNLGLSAEITAALTDQGYEQPTAIQTAAIPKVLAGHDLLAAAQTGTGKTAAFMLP
SLERLRRYATTSTSPAMHPVRMLVLTPTRELADQIDQNTAAYIKNLPLRHTVLFGGMNMD
KQTADLRAGCEIVVATVGRLLDHVQQKNIRLDKVEIVVLDEADRMLDMGFIDDIRRIMQL
LPKQRQTLLFSATFSPPIRKLAQDLMYQPEQVQTAPQNTTSASVEQHIIAIDTAQKRNLL
ERLIVDLHINQVIVFCKTKQSVDQVARDLKRRGLSVAPIHGDKSQQTRLETLNAFKAGEL
RVLVATDVAARGLDIVELPFVINYEMPTQAEDYVHRIGRTGRAGAEGVAISLMDEDEQKM
FEAIKELIGKELPVERIEGFEPRWWQHQQEGSRPAAEHSSRETRESRETRHSRRGRNSDS
RSKSFSHSSYFDSPAQECGRIPGRSRRSRPVCALVQPNYGVDS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacccctttaccaatctcggcctcagcgctgaaatcaccgctgcactgaccgac
cagggctacgagcagcccaccgccatccaaaccgccgccatccccaaagtgctggccggt
cacgatctgctggccgccgcccaaaccggcaccggcaaaactgcagccttcatgctgccc
agcctggaacgcctgcgccgctatgccaccaccagcacctcgcccgccatgcatccggtg
cgcatgctggtactcacccctacccgcgaactggccgatcaaatcgaccaaaacaccgcc
gcctacatcaaaaacctgccgctgcgccacacagtgctgttcggcggcatgaatatggac
aaacaaactgccgacctgcgcgccggctgcgaaatcgtggtggccaccgtggggcgccta
ctggatcacgtacagcaaaaaaatatccggctggataaagtggaaatcgtggtgctcgac
gaagccgaccgcatgctcgacatgggcttcatcgacgacatccgccgcatcatgcagctg
ctgcccaaacagcgtcaaaccctgctgttttccgccacattctcccctcccatccgcaag
ctggcgcaagatctcatgtaccagccggaacaggtgcaaactgccccgcaaaataccacc
agcgccagcgttgaacagcacatcatcgccatcgacaccgcacaaaagcgcaatctgctg
gagcggctaattgtggatttgcacatcaaccaggtaatcgtgttctgcaaaaccaagcag
agcgttgatcaggtagcccgcgatctgaaacggcgcggtctcagcgtggcgccgattcac
ggcgacaaatcacagcaaacccgcttggaaacgctcaacgccttcaaagccggcgaactg
cgcgtgttggtagccaccgacgtggctgcacgcgggctggacattgtcgagctgccattt
gtcatcaactacgaaatgcctacccaggccgaagattatgtgcaccgcatcggccgcacc
ggccgcgccggcgccgagggcgtggccatctcgctgatggatgaagacgaacagaaaatg
tttgaagccattaaagaactcattggcaaagaactgccggtggaacggattgagggcttc
gagccgcgctggtggcaacatcagcaggaaggcagccgccccgccgccgagcactcctcg
cgcgaaacacgtgagtcgcgtgaaacacgccacagccgacgaggccgcaactcagacagc
cgcagcaaatccttctcacacagcagctacttcgacagccccgcacaggaatgcggccgc
atccccggccgcagccgccgcagccgccctgtgtgcgcattggtacaaccaaactacggt
gttgatagttga
DBGET
integrated database retrieval system
