Eikenella exigua: EZJ17_09590
Help
Entry
EZJ17_09590 CDS
T06211
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
eex
Eikenella exigua
Pathway
eex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EZJ17_09590 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eex03019
]
EZJ17_09590 (pnp)
03016 Transfer RNA biogenesis [BR:
eex03016
]
EZJ17_09590 (pnp)
Enzymes [BR:
eex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EZJ17_09590 (pnp)
Messenger RNA biogenesis [BR:
eex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EZJ17_09590 (pnp)
Transfer RNA biogenesis [BR:
eex03016
]
Prokaryotic type
tRNA degradation factors
EZJ17_09590 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
Methyltransf_FA
KH_2
S1_RRP5
KH_PNO1_2nd
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QED92827
UniProt:
A0AAX1F9R1
LinkDB
All DBs
Position
complement(1887227..1889332)
Genome browser
AA seq
701 aa
AA seq
DB search
MFNKHVKSFQYGQHTVTIETGEIARQAAGAVKVSMGETVVLVAVTANKEVKAGQDFFPLT
VDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPLFPEGFFHDIQIVAMVVSV
DPEIDSDIPAMIGASAALVLSGVPFAGPIGAARVGYLNGEYVLNPTKTQLAKSQLDLVVA
GTAQAVLMVESEAQILPEDVMLGAVVYGHNEMQAVIRAINELADAVNPEVWDWKAPETDA
ALVAKVQEIAGQTVAEAFKIRQKQARTAKLDEAWAAVEAALITEDTDTLAANQIKGIFKH
LEANVVRSQILAGQPRIDGRDTRTVRPINIQTGVLPRTHGSALFTRGETQALAVATLGTQ
RDEQIIDALSGEYTDRFMLHYNFPPYSTGECGRMGAPKRREIGHGRLAKRALLGVLPTPE
EFSYTMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILEGNKFAVLT
DILGDEDHLGDMDFKVAGTTEGVTALQMDIKIQGITKEIMQIALAQAKEARLHILEQMKA
AVAGPQELSQHAPRLFTMKINQDKIRDVIGKGGETIRALTAETGTEINIEDDGTITIAAV
NVEAVEAARKRIEEITAEVEVGQVYNGVVIKILDNNVGAIVSVMPGKDGLVHISQIAHER
VKDVNDYLKVGQNVRVKALEVDDRGRVRLSMKALLDQTREQ
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaacacgtcaaatccttccaatacggccagcacaccgtcaccatcgaaacc
ggcgaaatcgcccgccaggcggcgggtgcggtgaaagtatccatgggtgaaaccgtggtg
ctggtggccgttaccgccaataaagaagtgaaagccgggcaggatttcttcccgctcacc
gtggattatctggagcgcacctatgccgcaggcaaaatccccggcggcttcttcaagcgc
gaaggcaaacagagtgaaaaagaaatcctcaccagccgcctgatcgaccgccccatccgc
ccgctgttccccgaaggcttcttccacgatatccaaatcgtggccatggtggtatcggtt
gatccggaaatcgattccgacattcccgccatgatcggcgcttctgccgcgctggtattg
agcggcgtgcctttcgccggccccatcggtgccgcccgcgtaggctacctgaacggcgaa
tacgtgctgaacccgaccaaaacccagctggccaaatcgcagctggatttggtggtggcc
ggtactgcacaagccgtgctgatggtggaatccgaagcccaaatcctgcccgaagacgtg
atgctcggcgccgtggtatatggtcacaatgaaatgcaggccgttatccgcgccatcaac
gagctggccgacgcggtcaaccccgaagtgtgggactggaaagcgcccgaaaccgatgcc
gccctggtggccaaagtgcaggaaattgccggtcaaaccgtagccgaagctttcaaaatc
cgccaaaaacaggctcgcaccgccaagctggacgaagcctgggccgccgtggaagccgcg
ctgatcacggaagacaccgacaccctcgctgccaaccaaatcaaaggcattttcaaacat
ttggaagccaacgtggtgcgcagccagattctggccggccagccgcgcatcgacggccgc
gacacccgcaccgtgcgccccatcaacatccaaaccggcgtgctgccgcgcacccacggc
tccgccctcttcacccgtggcgaaacccaagccctggctgtggccaccctcggcacccag
cgcgacgagcaaatcattgatgccttgagcggcgaatacaccgaccgcttcatgctgcac
tacaacttcccgccctactccaccggcgaatgcggccgcatgggcgcgcccaaacgccgc
gaaatcggccacggccgcctggccaaacgcgccctgctcggcgtgttgcccacgcccgaa
gaattcagctacaccatgcgcgtggtatctgaaatcaccgaatccaacggctcttcttcc
atggcctccgtgtgcggcggctgcttgagcctgctctccgccggcgtaccgctcaaagcc
cacgtggccggtatcgccatgggtttgattctggaaggcaacaaattcgccgtgctcacc
gatatcttgggcgacgaagaccacctcggcgacatggacttcaaagtggccggcaccacc
gaaggcgtgaccgccctgcagatggacatcaaaatccaaggcatcaccaaagaaatcatg
cagattgccctggcgcaagccaaagaagcccgcctgcacatccttgagcagatgaaagcc
gccgtggccggcccgcaagagctctcgcagcacgcgccgcgcctcttcaccatgaagatt
aaccaagacaaaatccgcgacgttatcggcaaaggcggcgaaaccatccgtgccctcacc
gccgaaaccggcaccgaaatcaacattgaagacgacggcaccatcaccatcgccgccgtg
aatgtggaagccgtggaagccgcccgcaaacgcatcgaagaaatcactgccgaagtggaa
gtgggccaggtgtacaacggcgtggtgattaagattttggacaacaacgtgggcgccatc
gtatccgtgatgcccggcaaagacggcctggtgcacatcagccaaatcgcccacgagcgc
gtgaaagacgtgaacgactacctcaaagtcggccaaaacgtgcgcgtgaaagcgctggaa
gtggacgaccgcggccgcgttcgcctctccatgaaagccctgctggatcaaacccgcgag
caataa
DBGET
integrated database retrieval system
