Enterococcus faecalis V583: EF1170
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Entry
EF1170 CDS
T00123
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
efa
Enterococcus faecalis V583
Pathway
efa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EF1170 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efa03021
]
EF1170 (rho)
03019 Messenger RNA biogenesis [BR:
efa03019
]
EF1170 (rho)
Transcription machinery [BR:
efa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EF1170 (rho)
Messenger RNA biogenesis [BR:
efa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EF1170 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AAO80970
UniProt:
Q836E4
LinkDB
All DBs
Position
1140672..1141964
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AA seq
430 aa
AA seq
DB search
MSDYLTMAELENSTLKDIYAYAKEFKIPYYSQMNKKELSLAVIRAQAEKQGFFFMEGILD
IVSQDGYGFLRPINYGPSAEDIYISSSQIRRFGLRNGDKVAGKARPPKESERYYGLMHVE
SVNGKDPEEAKERPHFPALTPLYPEKQLTLETTAGRLSTRMIDVFAPIGFGQRGLIVAPP
KAGKTSVLKEIANGITENHPDVELILLLIDERPEEVTDLERSVKGDVVSSTFDQQPQNHT
RVAELVLDRAMRLVEDKRDVVILMDSITRLARAYNLVVPPSGRTLSGGIDPAAFFKPKRF
FGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLSRELAERRIFPAIDI
KKSSTRKEELLMTPEQLEETWKLRNNMSGDSLEYTDQFIKMLKRTQNNQQLFEVFHDVSF
GKQIKRNPKR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactatttaacaatggctgaattggaaaacagtacgttaaaagatatttatgca
tacgcgaaagagtttaaaattccttattatagccaaatgaacaaaaaagaattgtcttta
gctgtgattcgtgcacaagctgagaagcaagggtttttcttcatggaaggaattttagat
attgtttctcaggatggttatggctttttgcgaccaattaattatggaccaagtgcagaa
gacatttatatttcttcttctcaaattcgtcgtttcggattgagaaatggggacaaagta
gctggcaaggcgcgtccgccaaaggaatcagaacgttactatggactcatgcatgttgaa
agtgtcaatgggaaagatcctgaagaagcgaaagagcggccacattttccagcgctaaca
ccgttgtatcctgaaaaacaattaacgttagaaacaacggctggcagattatcaacacga
atgattgatgtatttgccccaattggttttgggcaacgtggtttaattgtagcgccgcca
aaagcgggaaaaacaagtgttttaaaggaaattgctaatgggattacagaaaatcatcct
gatgtggaattgattctgttgttaattgacgagcgccctgaagaagtgactgatttagag
cgaagcgttaaaggcgatgtggtttcttcaacttttgatcaacaaccacaaaatcatacg
cgagttgctgaattggttctggatcgagcaatgcgcttagttgaagacaaacgggacgta
gttattttaatggacagcatcactcgtttagcaagggcctataatttagtggtcccgcct
agtggtcgaaccttaagtggcggaatagatccagctgcgtttttcaaacctaaacgattt
tttggtgctgccagaaatatcgaagaagggggcagtctgactattttagccacggcattg
gtggatacaggtagccgaatggatgatgtcatctatgaagaattcaaaggtacaggcaac
atggagctccatttatctcgtgaattagcagaacgccgtattttcccagcaattgatatt
aaaaaatcaagtacgcgaaaagaagagttgctaatgacaccagaacaactagaagaaacg
tggaaattgagaaataatatgtcaggagactcgctggaatatacggatcaattcataaaa
atgttgaaacggacccaaaataatcaacaattatttgaagttttccatgatgtttcgttt
ggcaaacaaattaaaagaaatccaaaaagataa
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