Enterococcus faecalis V583: EF1377
Help
Entry
EF1377 CDS
T00123
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
efa
Enterococcus faecalis V583
Brite
KEGG Orthology (KO) [BR:
efa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efa03019
]
EF1377
03009 Ribosome biogenesis [BR:
efa03009
]
EF1377
Enzymes [BR:
efa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EF1377
Messenger RNA biogenesis [BR:
efa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EF1377
Ribosome biogenesis [BR:
efa03009
]
Prokaryotic type
rRNA helicases
EF1377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Microtub_bd
NAT10_TcmA_helicase
CMS1
Motif
Other DBs
NCBI-ProteinID:
AAO81168
UniProt:
Q835K0
LinkDB
All DBs
Position
1353068..1354417
Genome browser
AA seq
449 aa
AA seq
DB search
MPSFKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPL
MDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTDKQRQLNKLK
HQQPHVVIGTPGRILDMMNEQALKVHTAFAFVVDEADMTLDMGFLAEVDQIAGRLPEKLQ
MLVFSATIPEKLRPFLKKYLENPVIEHIKPKAVISETIDNWLISTKGKNSNKIIYQLLTI
GHPYLAIVFANTKQRVDEITDYLKDQGLKVAKIHGDITPRERKRVMRQVQNLDYQYVVAT
DLAARGIDIEGVSHVINAEVPHELDFFIHRVGRTGRNGLNGTAITLYSPADDEAITQIEQ
LGVSFKPKEIKNGEIVETYDRNRRTKREKSREELDPTLIGLVKKKKKKIKPGYKKKINWA
IEDSNKKKRKIERRQKDRSARKAKKNSSN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgccttcatttaaacaatttcaatttcaaccttttatcaacgaagcactcgcagaaaaa
gggtttgaagaaccaacagaagtccaagaaaaattaatcccaatcattaagaaagggaaa
agtgttattggacaatcgcaaacaggaagtggaaagacgcatacttttttacttccatta
atggataaagttaagccaactatcgacgaagtacaaattgtgattactgcgcctagtcgt
gaattagccaatcaaatttatcaagaagcgcagcaactggctcgtttcagtcaaccagaa
attcgagtgtcaaattttgttggcggaacagataaacaacgtcaattaaataaattaaag
catcagcaacctcatgtggtgattggtacaccagggcgtattttagatatgatgaatgaa
caagccttgaaagtgcatacggcttttgcctttgttgtcgatgaagcagacatgacatta
gatatgggctttttagcagaagtcgatcaaattgcgggtcgtttgccagaaaaattacaa
atgctcgttttttctgcaaccattccagaaaaattacgaccatttttaaaaaaatattta
gaaaatccagtgattgaacatatcaaaccaaaagcagttatttcagaaacaattgacaat
tggttgatttccaccaaaggaaaaaacagcaataaaataatttatcaattattgactatc
gggcatccttatttagcgattgtttttgcaaatactaaacaaagagttgatgaaatcacc
gattacttaaaagatcagggcctaaaagttgccaaaattcatggagacattacaccacgc
gaaagaaaacgtgtgatgcgtcaagttcaaaatcttgactaccaatatgtagtagctact
gatttagccgcacgtgggattgatattgaaggggtttcacatgtcatcaatgcagaagtt
ccacatgaattggacttctttatccatcgggttggccgcacaggacgtaatggattgaat
gggactgccataacattatattcaccagcagatgatgaagcgattactcagattgagcag
ttaggtgtttctttcaaaccaaaagaaattaaaaatggtgagattgtagagacgtatgat
cgtaatcgtcgaacaaaacgagaaaaatctcgagaagaattagacccaacgttaattggt
ttagtgaaaaagaaaaagaaaaaaattaaaccaggatacaagaaaaaaattaattgggca
attgaagacagcaataagaaaaaacgtaaaattgaacgtcgtcaaaaagatcgttctgct
aggaaagcaaaaaagaattcttctaactaa
DBGET
integrated database retrieval system
