Empedobacter falsenii: FH779_05335
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Entry
FH779_05335 CDS
T06702
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
efal
Empedobacter falsenii
Pathway
efal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FH779_05335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efal03019
]
FH779_05335
03016 Transfer RNA biogenesis [BR:
efal03016
]
FH779_05335
Enzymes [BR:
efal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FH779_05335
Messenger RNA biogenesis [BR:
efal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FH779_05335
Transfer RNA biogenesis [BR:
efal03016
]
Prokaryotic type
tRNA degradation factors
FH779_05335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
MOEP19
S1_2
Motif
Other DBs
NCBI-ProteinID:
QLL57536
UniProt:
A0A7H9DRU5
LinkDB
All DBs
Position
1134148..1136334
Genome browser
AA seq
728 aa
AA seq
DB search
MIPQAITEKITLSDGREITIETGKLAKQADGSVVVRMGDTMLLATVVANKEANPGVDFLP
LTVDYREKFYAAGRIPGNFFRREAKPSDDEVLTMRLVDRVLRPMFPEDFHAEVQVMISLI
SYDKNVMPEALAGLAASAAIAITDIPFTLISEARVIRLNGELMINPSKEQLDQADIDIMV
GASKDSVVMVEGEMSEISEREMLDAIEFAHAEIKKQIEAQESLAAKVGKSLPKREYSHET
HDEEIREKVWAYGYDKFYDIAKHPSDKHERGDKFAQVEADFLAQYEGDEEELARVAPFAH
IYFHDVQKEAVRQLILNEGIRLDGRDPKTIRPIWTEVDYLPSTHGSAIFTRGETQALATV
TLGSSKDANMVDGVVTNFDEKFFLHYNFPPFSTGEARPLRGTSRREVGHGNLAQRALAQM
LPDDCPYTVRIVSEVLESNGSSSMATVCAGTLAIMDSGLQMKKPVSGIAMGLITDTKSGK
FTVLSDILGDEDHLGDMDFKVTGTADGITACQMDIKVQGLSMEIMETALLQAKEGREHIL
GKLLETLPAPRPQLKPNAPKVVVIEIPKEFIGAVIGPGGKVIQEMQKETETVIAITELDT
TGRVEINGVIQENIDRVVERIKQIAFVPEVGETYHSVVKSIKPFGAFVEIAKGVEGLVHI
SELEHRRLEKVEDSVNIGDKIDVKFLGYDDKKKMKLSRKALLPKPERTEKPAKPAEKKED
KPQDNKEA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgattccacaggcgatcacagaaaaaattactctttcagacggaagagaaattacaatc
gaaacagggaaattagcaaaacaagctgacggatctgtggttgtacgcatgggcgacacc
atgttattagctacagttgtagcaaacaaagaagcaaatccaggtgtagattttttacct
ttaacagtagattatagagaaaaattttacgctgcaggacgcatcccagggaatttcttc
agaagagaagcaaaaccatcagacgatgaagtattaacaatgcgtcttgtagaccgtgtt
ttacgtccaatgtttccagaagacttccatgctgaggttcaggtcatgatctcacttatt
tcttacgacaaaaatgtaatgccagaagctttagctggtttagctgcatcagcagccatt
gcaattacagatattcctttcacattaatttcagaagctcgcgttattcgtttgaatggt
gagttaatgattaatccttcaaaagagcaattagatcaagctgatatcgacattatggtt
ggtgcttctaaagattctgttgttatggtagaaggggagatgagcgaaatttctgagcgt
gaaatgttagacgcaattgaatttgctcatgctgaaattaaaaaacaaattgaagcacaa
gaaagtttagcagcgaaagtaggtaaatctttaccaaaacgtgaatatagccacgaaaca
cacgatgaagaaattcgcgaaaaagtgtgggcttatggatatgataaattttatgatatc
gctaaacatccatctgataaacacgaaagaggtgataaatttgctcaagttgaagcagat
ttcttagctcaatacgaaggagatgaagaagagttagctcgtgtagctccttttgctcac
atttacttccacgatgtacaaaaagaagctgtacgtcaattaatcttaaacgaaggaatt
cgtttagatggtcgtgatccaaaaacgattcgtccaatttggacagaagttgattattta
ccatcaactcacggttctgcaattttcacacgtggagaaactcaagcattagctacagta
actttaggttcttctaaagatgctaatatggttgatggagttgtaacaaacttcgacgaa
aaattctttttacactataatttcccaccattctcaacaggtgaagctcgtccattaaga
ggaacttctcgtcgtgaagttggtcacggaaacttagcacaacgtgctttagcgcaaatg
ttaccagacgattgtccttatacagttcgtatcgtttctgaagtattagaatctaacggt
tcttcttctatggcaacagtttgtgcaggaacattagcaattatggattcaggtttacaa
atgaaaaaaccagtttcaggtattgcaatgggattaatcacagatactaaatcagggaaa
tttacagtattgtctgatatcttaggagacgaagatcacttaggagatatggactttaaa
gtaacaggaactgcagatggtatcacagcttgtcaaatggatattaaagtacaaggttta
tctatggaaatcatggaaacagctttgttgcaagcaaaagaaggtcgtgagcatatttta
ggtaaattgttagaaactttaccagcgcctcgtccacaattgaaaccaaatgcaccaaaa
gttgttgtaatcgaaattcctaaagaattcattggagcagtaatcggacctggaggaaaa
gtaattcaagaaatgcaaaaagaaactgaaacagttattgcaattactgagttagatacg
acaggacgtgtagaaatcaatggtgtgattcaagaaaacatcgatcgcgttgtagaaaga
atcaaacaaattgctttcgttccagaagttggagaaacatatcattcagttgtaaaatct
atcaaaccatttggagcgtttgtagaaattgctaaaggtgttgaaggtttagttcatatt
tctgaattagagcacagacgtcttgaaaaagttgaggattctgtaaacatcggtgataaa
attgatgttaaattcttaggttacgatgataaaaagaaaatgaaattatctcgtaaagct
ttattgccaaaaccagagagaacagaaaaacctgctaaaccagcagagaaaaaagaggat
aaacctcaagataataaagaagcttaa
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