Empedobacter falsenii: FH779_08440
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Entry
FH779_08440 CDS
T06702
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
efal
Empedobacter falsenii
Pathway
efal03420
Nucleotide excision repair
efal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
efal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FH779_08440
03430 Mismatch repair
FH779_08440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efal03400
]
FH779_08440
Enzymes [BR:
efal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FH779_08440
DNA repair and recombination proteins [BR:
efal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FH779_08440
MMR (mismatch excision repair)
Other MMR factors
FH779_08440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
DUF1840
ResIII
AAA_11
DEAD
CarD_TRCF_RID
Meiotic_rec114
Motif
Other DBs
NCBI-ProteinID:
QLL58107
UniProt:
A0A7H9DSC5
LinkDB
All DBs
Position
complement(1812870..1815212)
Genome browser
AA seq
780 aa
AA seq
DB search
MEENYLEKLNEPQRLAVEATEGPVMVIAGAGSGKTRVLTYRIAHLLNKGVDAFNILSLTF
TNKAAREMKERIGHVVGEANAKALWMGTFHSVFARILRVEAPLLGYPSDFTIYDQQDAVS
VMTKIINEMHLDKDIYKAKQVLGRISQYKNNLITVRAYHNNQALIEADNEAMRPRMGDIY
RAYVDRCFKSGAMDFDDLLLRTNEILTRFPEVLAKYQERFKYIMVDEYQDTNHSQYLIVK
ALASRYENLCVVGDDAQSIYAFRGANIRNILSFKSDYPDAKLYPLEQNYRSTQMIVEAAN
QIIKQNQDQLEKNVWTANETGEKIAVYRGLSDADEARYIATQIWERQINEHLQPKDFAIL
YRTNAQSRALEEALRKRGIQYRVYGGTSFYQRKEIKDMVGYMRLLINQNDEEALLRTINY
PARGIGQTTISKLLVAADQHQISLFSLIENIAIYAPTIGINAGTANKLNDFVLMIKRFQV
MLKSHDVYEVTMEMAKTTQLLNALKEDSTPEGVSRLENVQELLNSIQGYVEEQQQLDEGD
ASLGGFLENIALATDADNEEDDDNKVNLMTVHLAKGLEFPVVFIAGLEENLFPSMMSVNT
RAELEEERRLFYVALTRAEKVAYMTYSVSRFRWGKIIDCEPSRFLEEIDDSFLEWKNLNI
SARASNNSGLSADLFGDEPTPQQYQQREKSVARPNPRARVEPAQPRSNFKPVNQTKSSAS
STANAQGLQVGQVVVHDRFGRGIVKDLQGEPSDMKAIIHFDNAGEKKLLLNFAKLKIIRS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaattatttagaaaaactgaacgaaccacagcgtttggctgtagaagctacc
gaaggtccagtaatggtgattgcaggtgcgggttctggaaaaacgagagtgttaacttat
cgcattgctcatttactaaataaaggagttgatgctttcaatatattgtctttaacattt
accaataaagctgcccgagaaatgaaagaacgtatcggacatgtagttggtgaagcgaat
gcaaaagctctttggatgggtaccttccactctgtttttgcgcgtattctacgtgttgaa
gctccgcttttaggttatccatcagattttacaatttacgatcaacaagatgcagtttcg
gtaatgacaaagattattaacgaaatgcatttggataaagatatttacaaagcaaaacaa
gttttgggaagaatttctcaatacaaaaataacttgattacagttagagcttatcataac
aatcaagctttaattgaagcagataatgaagcaatgcgacctcgaatgggtgatatttat
agagcttatgtagatcgttgtttcaaatctggtgcaatggattttgatgatttattgtta
cgtaccaacgaaattttgacgcgttttcctgaggttttagcaaaatatcaagaacgtttc
aaatatattatggtagatgagtaccaagataccaatcattctcaatatttgattgtaaaa
gcattggcttctcgttacgaaaacctttgtgtggttggtgatgatgcgcaatctatctat
gctttccgtggtgcaaatattcgaaatattttatcattcaaatctgattatcctgatgcg
aaattgtatccattagaacaaaattatcgttcgacgcaaatgattgtggaagctgcgaat
cagattatcaaacaaaatcaagatcaattagaaaaaaatgtttggacagcgaatgaaact
ggagaaaaaatagccgtttatcgtggactttctgatgctgatgaagcacgctatattgcg
acacaaatttgggaaagacagatcaatgaacatcttcaaccaaaagattttgctattctt
tatcgtacaaatgctcaatctcgtgctttagaagaagccttgagaaaaagaggaattcaa
taccgtgtttatggcggaacctctttctatcagcgtaaagagattaaggatatggttggc
tatatgagattattgattaatcaaaatgatgaagaagctttattgcgaacaatcaattat
ccagcacgtggaattggtcaaacaacaatttctaaacttttggtcgcggcagatcaacat
caaattagtttattttctttgattgaaaatattgcaatatatgctccaacaattggtata
aatgcaggaacagcaaacaaactgaatgattttgtgttgatgattaagcgtttccaagtc
atgttaaaatcgcatgatgtgtatgaagtaacgatggaaatggctaaaacgactcaatta
ttgaatgcgttgaaagaagattctacaccagaaggtgtttctcgtttagaaaacgttcaa
gagttgttaaactcgattcaaggttatgttgaagaacaacaacaattagacgaaggagac
gcttctttaggaggttttttagaaaatattgctttagcaactgatgcggataacgaagaa
gatgacgataacaaagtaaatttgatgactgttcacttagcaaaaggtttagaattccct
gttgtatttattgcaggtttagaagaaaatcttttcccttctatgatgagcgttaacaca
cgtgctgaattagaagaagagcgtcgtttattttatgttgccttgacacgtgccgagaaa
gtggcttatatgacctattctgtttcacgttttcgttggggaaaaattatcgattgcgaa
ccatctcgtttcttagaagaaattgatgatagtttcttagaatggaaaaatctgaatatt
tctgcaagagcttcaaacaatagtggattatcggctgatttatttggagacgaaccaaca
ccgcaacagtatcaacaacgagaaaaatcggttgcacgacctaatccgagagctcgtgta
gaaccagctcaaccaagatcaaatttcaaaccagtaaatcaaacgaaaagtagtgcttca
tcaacagcgaatgctcaaggtttacaagttggtcaagttgtcgttcacgatcgttttgga
cgaggaattgtgaaagatttgcaaggagaaccatcagatatgaaagccattattcatttt
gataatgctggagagaaaaaattactcttaaattttgctaaactaaaaatcattcgatca
taa
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