Empedobacter falsenii: FH779_10640
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Entry
FH779_10640 CDS
T06702
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
efal
Empedobacter falsenii
Pathway
efal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FH779_10640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efal03019
]
FH779_10640
Enzymes [BR:
efal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FH779_10640
Messenger RNA biogenesis [BR:
efal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FH779_10640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QLL58518
UniProt:
A0A7H9DTI4
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All DBs
Position
2288326..2289681
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AA seq
451 aa
AA seq
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MKATFADFELTKQLSSALEKLNITTPTPIQEKSFKPILSGRDIMGIAQTGTGKTMAYLLP
LLNTYQYSKTNQPKIVILVPTRELVVQVTDILEQLTEFINVRVLGIYGGVNINTQKLLVY
EGVDILVGTPGRVLDLAIDNVLSFKEMKKLVVDEFDEMLSLGFRPQLIHLFTMMSDKRQN
ILFSATMTDQVDDMLHEYFKNPIEISLARSGTPLEKISQSAISVENFNTKLNLIVHQLDD
KAKFEKVLIFANNKKHADLIFNHLDEIYPDEFGVIHSNKSQNYRLRTMEAFTRDEYRGII
TTDIMARGLDIPDVTHVINFEIPDVPEQYIHRIGRTGRADKKGEAISYFSEKEIERLDDI
EALMDKEIEEIPFPEDEVKINPVKREFEKDVVKMKQLTTVKIEERGAAFHEKKDKNKKVN
LGGPTKRKPPKSKPKNRGQQKQKAKARKKGK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctacattcgcggatttcgaattaacaaaacaattgagttcggctttagaaaag
ttgaatatcacaacccctactccaattcaagaaaaatcattcaaaccgattctttctgga
cgagatataatgggaattgcccaaacaggtacaggtaaaacaatggcttatttattgcct
ttgttaaatacatatcaatactctaaaacgaatcaaccaaagattgttattttggttccg
acacgcgaattagttgttcaggttaccgatattttagagcaattaacagaatttatcaat
gttcgtgttttaggaatttatggtggtgtaaacatcaatacacaaaaattattggtgtat
gaaggcgttgatattttggttggaacaccaggtcgtgtcttagatttggcgattgacaat
gttttatcattcaaagaaatgaaaaaattagtagttgacgaatttgacgaaatgttgagt
ttaggttttcgtccgcaactgattcatttatttacaatgatgagcgataaacgtcaaaac
attttattttctgcaacgatgacagatcaggttgatgatatgttgcacgaatatttcaaa
aatcctattgaaatttcgttggctcgttcgggaactcctttagaaaaaatttctcaatca
gctatttctgttgagaatttcaatacaaaattgaatttaattgttcatcaattagatgat
aaagctaaatttgagaaagttttaattttcgcaaacaataaaaaacatgctgatttaatt
ttcaatcatttagatgaaatttatccagatgaatttggtgtaattcattctaataaatct
caaaattatcgtttgagaacaatggaagcctttaccagagatgaataccgaggaattatt
acaactgatattatggctcgtggtttagatattccagatgttacacatgtaatcaatttc
gagattccagatgttccagaacaatatattcaccgaattggacgtacaggacgtgcggat
aaaaaaggtgaagcaatttcttatttttctgaaaaagaaattgagcgtttagatgatatc
gaagccttgatggataaagagattgaagagattcctttccctgaagatgaagtaaaaatc
aatcctgtaaaacgtgaattcgagaaagatgttgtaaaaatgaaacagcttacaactgta
aaaattgaagaacgtggtgcagcatttcacgagaaaaaagataaaaataaaaaggtgaat
ttgggaggtcctacaaaacgtaaaccaccaaaatctaaacctaaaaaccgtggtcagcaa
aaacaaaaagcgaaagcacgcaaaaaaggaaaataa
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