Empedobacter falsenii: FH779_12425
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Entry
FH779_12425 CDS
T06702
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
efal
Empedobacter falsenii
Brite
KEGG Orthology (KO) [BR:
efal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efal03400
]
FH779_12425 (sbcD)
DNA repair and recombination proteins [BR:
efal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FH779_12425 (sbcD)
Archaeal homologous recombinant proteins
FH779_12425 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QLL59873
UniProt:
A0A7H9DXE2
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All DBs
Position
complement(2667993..2669198)
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AA seq
401 aa
AA seq
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MKILHTADWHLGKKLDSFSRLEEQILVMNEIVEIADQEQVDLVLIAGDLFDNFNPSVEAV
ELFYKTLKRLSNNGKRPVVAISGNHDSPSLIDAPDPLARECGIILIGYPNAKIQEFELND
FKISKSVEGMIELKLNSFDFPIRIIHTPYANEIRLKQYFGENKEEALNEVLATNWKNIAN
EYCDENGVNLLMAHLYMNQKGAEILEEPEGEKPIKIGNADMIFSEAIPPQIQYTALGHLH
GFKNIGTEEKPVVYSSSPLCYSFSEAGQTKYVSIIEAELNQAISYHKIELKNGKPLIRKT
FDDINVAVEWLNENQNALVELTLESDSFLKADERKLIYQSHDGIIHLIPKVKNQEVETVE
YKFADQTKDMKELFTDYFKSKNGNQEPNDEIKDLFNEILNS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
ataaaaattctacatacagccgattggcatttgggcaaaaaattagatagtttttcgaga
ttagaagagcaaattttagtgatgaatgaaattgtcgaaattgcagatcaagaacaagtc
gatttggtacttattgcgggcgatttatttgataattttaatccaagtgtagaagctgta
gaattattttataaaacattaaaaagactttcgaataatggaaaacgtcctgttgtagcg
atttctgggaatcacgattctccaagtttgattgatgctccagatcctttggcgcgcgaa
tgtggaattattttgattggttatccaaatgcaaaaattcaggaatttgaattaaatgat
ttcaaaatttcgaaatctgtggaaggaatgattgaattgaaattaaattctttcgatttt
ccgattcgaattattcatacaccttatgcaaacgaaatccgtttgaaacaatattttgga
gagaataaagaagaagctttgaatgaagttttagcgacaaattggaaaaatattgcgaat
gaatattgtgacgaaaatggagttaatttgttgatggcgcatttgtatatgaaccaaaaa
ggtgctgaaattttagaagaaccagaaggagaaaaaccaattaaaattggaaatgcagat
atgattttttcagaagctattccgcctcaaattcaatatacagcgcttgggcatttgcat
ggttttaagaacatagggacggaagaaaagcctgttgtgtacagctcttcgcctttgtgt
tatagtttttccgaagctggtcaaacgaaatatgtttcgataatagaagcagaactaaat
caagctatttcttatcataaaatagaattaaagaacggaaaaccacttattcgtaaaact
tttgatgatataaatgtagctgtagaatggttgaatgaaaatcaaaatgcgttggttgaa
ttgactttagaaagtgattcttttttgaaagctgatgaacgaaaattgatttatcaatca
catgatggaattattcatttgattccgaaagttaaaaatcaagaagttgaaacggttgaa
tataagtttgcagatcaaacaaaagatatgaaggaattgtttacagattatttcaaatcg
aagaacggaaatcaagaaccaaacgacgaaataaaggatttgtttaacgaaattttgaat
tcataa
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