Empedobacter falsenii: FH779_13915
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Entry
FH779_13915 CDS
T06702
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
efal
Empedobacter falsenii
Brite
KEGG Orthology (KO) [BR:
efal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efal03032
]
FH779_13915 (topA)
03400 DNA repair and recombination proteins [BR:
efal03400
]
FH779_13915 (topA)
Enzymes [BR:
efal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FH779_13915 (topA)
DNA replication proteins [BR:
efal03032
]
Prokaryotic type
DNA Topoisomerases
FH779_13915 (topA)
DNA repair and recombination proteins [BR:
efal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FH779_13915 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
QLL59112
UniProt:
A0A7H9DV91
LinkDB
All DBs
Position
complement(2965401..2967935)
Genome browser
AA seq
844 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQGFLGDDFIVESSFGHVVDLPKKGMGIEIENHYKPIYEVTPDK
KEVVSKLKKLSSKAQTIWLASDEDREGEAISWHLYHVLGLEKKDTKRIVFNEITKKAIQR
AVENPRQIDENLVDAQQARRVLDRLVGFEMSPILWKKIKPGLSAGRVQSVSVRLIVEREK
EIQNFVPVSSYKFIAIFETNEGRTLKAVLTKEFSTLKEAEDFLETCVGADFKVNDLQKKP
AKRTPSAPFTTSTLQQEASRKLGFSVSRTMRVAQQLYESGHITYMRTDSVNLSDDALTAV
KAEIESAYGNKYVEIRKYKNKNSSAQEAHEAIRPTHFENHSINADDSMRKLYELIWKRTV
ASQMANAELERTIIDIDNNKNNFIFQAKGEVIVFDGFLKVYQESFDDEDADDDKVLLPSV
KVNEQLKADEINGTERFSRPAARYTEASLVKKLEELGIGRPSTYAPTISTIQNRGYVEVG
ELDGQERKYNTLTLIDNQIKKVQQKEIFGADRRKLMPTDIGIVVNDFLVDYFTNVMDYDF
TARVENSFDEIAEGKLNWTKMIDEFYTKFHHVVEDVQENADRATGERELGIDPVSGKKVH
ARIGRFGPMIQIGEAEDEEKPRFASLQKHQSIHNITLEEAMKLFELPKTLGEYKAHEVEV
NIGRFGPYVKFDDKYISIPKEEDPMDLSFDRAVELIEEKLKADAPIAQYEGYDVTKGKGR
FGPFIKWNEWFINVPKKYDFDHLSQADIIELIEDKKRKESERVVREWAEQEIRLEKARWG
RYNLIQGKIKVELSKETNPEALTLAEVEKLIEAAKPKKKAAAKKAPAKKTTAKKTTTKKT
TTKK
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaatctcgttattgttgagtccccagcaaaagctaaaaccattcaaggtttt
ttaggtgatgattttatcgtggaatcaagttttggtcacgtggtcgatttaccaaagaaa
ggaatgggaatcgaaatcgagaatcattataagccaatatacgaagtaacacctgataaa
aaggaggttgtaagtaaactaaaaaaattgtcttcgaaagcccaaacaatttggttagca
tccgatgaggaccgcgaaggagaagcaatttcttggcatttgtatcatgttctaggatta
gaaaagaaagatacaaaacgtattgtttttaatgaaattacgaaaaaagcgattcaacgt
gcggtagaaaatccacgtcagattgatgaaaatttggttgatgcgcaacaagctcgtcgt
gttttggacagattagttggtttcgaaatgtcgccaattttatggaagaaaatcaaacca
ggtttatcagcaggacgtgttcaatcagtttctgttcgattaattgtcgaacgtgaaaaa
gaaattcaaaattttgttccagtttcgtcatataaattcattgcaatttttgaaacgaat
gaaggaagaaccttaaaagcagttttaacaaaagaattttcaacgttaaaagaagccgaa
gatttcttagaaacctgtgttggagcagattttaaagtaaacgatttacaaaagaaacct
gcaaaacgtacaccttctgcgccgtttacaacatcaactttgcaacaagaagcatctcgt
aaattaggtttttcagtttcgagaacgatgcgtgttgcacaacaattatacgaatctgga
catatcacatatatgagaacggatagtgtgaatttgtctgatgacgctttaacagcggta
aaagctgagatagaatctgcttacggaaacaaatatgttgagataagaaaatacaaaaac
aaaaattcatctgcacaagaagcgcacgaggcgattcgtccaacgcattttgaaaatcat
tcgattaatgcagacgattcaatgcgaaaattgtacgaattaatttggaaacgtacagtt
gcttctcaaatggcaaatgctgaactggagcgaactatcattgatattgataacaacaaa
aacaactttattttccaagcgaaaggagaagtaattgtgtttgatggtttcttaaaagtt
taccaagaatcgtttgacgacgaggatgcagatgacgataaagtattattgccaagtgtg
aaagttaatgagcaattgaaagcagatgaaataaacggtactgaacgtttttctcgtcct
gcggctcgttatacagaggcatctttggtgaaaaaattagaagaattaggaattggtcgt
ccgtcaacttatgcaccaacgatttctacaatccaaaatagaggttatgtggaagttggt
gaattggatggtcaagaacgaaaatataataccttaacgttaattgataatcaaatcaaa
aaagttcaacaaaaagaaatttttggtgctgatcgtcgcaaattaatgccaacggatatc
ggaatcgtggtaaatgatttcttggttgattattttacgaatgtgatggattatgatttt
acggcgcgtgtcgaaaatagttttgatgaaattgcggaaggtaaattgaattggacaaaa
atgattgatgaattttacacgaaatttcatcatgttgtagaagatgttcaagaaaatgca
gatcgtgcaactggagaacgcgaattgggaattgatcctgtttcgggtaaaaaagtgcat
gcgcgtattggacgttttggaccaatgattcagattggtgaagcagaagatgaagaaaaa
cctcgttttgcaagtcttcaaaaacatcaatctattcataatattaccttagaagaggca
atgaaattgttcgaattaccaaaaactttaggtgaatataaagcgcacgaagtggaggta
aatatcggacgttttggaccttatgtgaaatttgatgataaatatatttctattccgaaa
gaggaagatccaatggatttatcatttgatcgagcagtagaattaattgaagaaaaatta
aaagctgatgcgccgattgcacaatacgaagggtatgatgtaacaaagggaaaaggacgt
tttggaccgtttatcaaatggaacgaatggtttattaatgttccgaaaaaatacgatttc
gatcatttatctcaagctgatattatcgaattgattgaagataaaaaacgtaaagaatct
gaacgtgttgttcgcgaatgggcagaacaggaaattcgtttagagaaagcgcgttgggga
cgttataatttgattcaaggaaaaataaaagttgagttatcgaaagagacgaatccagaa
gcgttgactttggctgaggttgaaaaattaatagaagcagcaaaaccgaaaaagaaagct
gcggctaaaaaagcaccagcaaaaaagacaactgcgaagaaaacgacaactaaaaaaaca
acgactaaaaagtaa
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