Empedobacter falsenii: FH779_14565
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Entry
FH779_14565 CDS
T06702
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
efal
Empedobacter falsenii
Pathway
efal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FH779_14565 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efal03019
]
FH779_14565 (recQ)
03400 DNA repair and recombination proteins [BR:
efal03400
]
FH779_14565 (recQ)
Enzymes [BR:
efal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FH779_14565 (recQ)
Messenger RNA biogenesis [BR:
efal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FH779_14565 (recQ)
DNA repair and recombination proteins [BR:
efal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FH779_14565 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Peptidase_C36
DTX3L_a-b
Motif
Other DBs
NCBI-ProteinID:
QLL59234
UniProt:
A0A7H9DVL3
LinkDB
All DBs
Position
3108882..3111083
Genome browser
AA seq
733 aa
AA seq
DB search
MEATSKNLTSYLKKYFGFDQFKGQQHEIITSLLNKEDVFVLMPTGGGKSLCYQLPALMSD
GVAIIVSPLIALMKNQVDAIRGISENDGIAHVLNSSLNKSETKTVMTDIKDGVTKMLYVA
PESLTKEEYIDFFKSVKISFFAIDEAHCISEWGHDFRPEYRNLKAIINKIGDAPIIALTA
TATPKVQEDIQKTLGMQSAKVFKDSFNRTNLFYEIRPKVDQDKQIIKFIKQNDGKSGVIY
CLSRKKVEEITQLLQVNGINAIPYHAGLDAKTRSKHQDMFLMEDASVVVATIAFGMGIDK
PDVRFVMHYDMPKSLESYYQETGRAGRDGGEGVCIAFYDYKDIEKLEKFLASKPVAEREV
GMQLLSEVVAYAETSMSRRKFLLHYFGEEFDDKNGEGANMDDNMRNPKKMIEAKVDAVIA
LDVVQKTNQKLKLNDVVNVIVGKETSITKSYNLSSEDFFGIGKAKEDYYWKSILRQLIVR
NLLEKEIESYGILKITKSGKDFISKPTSFEIAEDIDFKKLLSEGSFEKEETSSAPIAFDD
VLLKQLKDLRKKISKKHQIPPFAVFQDSSLDDMTMQYPTTVKELTNVFGVGEGKAQKFGK
EFVDFIAQYVKDNDIIRPEDMVIKQVADKSSHKVYIIQSTDRKLNLEDVAEAKNMTMSDL
LSEMESIVYQGTKLNINYYIDEVLDEDQQEEIYEFLMDADSDSMSSLLDEFGDDYDEEEL
RLMRIKFISEVAN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaagccacttcgaaaaacttaacatcttacctaaaaaaatattttggtttcgaccaa
tttaaaggacagcagcacgaaatcattacaagcttactaaataaagaagatgtatttgtt
ttgatgccaactggaggaggtaagtctttatgttatcaattaccggcattaatgtcagat
ggagttgcgattattgtatcccctttaatcgcgctgatgaagaatcaagtagacgctata
cgtggaatttctgaaaatgatggaattgcccacgtattaaactcatctttaaataagtca
gaaacaaaaacagttatgacagatattaaagatggagtaactaaaatgttgtacgttgcg
cccgaatctttgacaaaagaagaatacatcgatttctttaaatcggtgaaaatttctttt
tttgcgattgatgaagcgcactgtatttctgaatggggacacgattttcgaccagaatat
cgtaatctaaaagcgattatcaacaaaattggtgatgcgccaattattgctttaacagca
acagcaacaccaaaagtacaagaagatattcagaaaactttgggaatgcaaagcgctaaa
gtttttaaagattcttttaatcgtacgaatttattttacgaaatccgcccaaaggttgat
caagacaaacaaatcatcaaatttatcaaacaaaacgatggtaaatctggtgtcatttat
tgcttgagtcgtaaaaaagttgaagaaattacgcaacttttacaagtaaacggaatcaat
gctattccttatcacgcaggtttagatgccaaaacacgtagcaaacatcaagatatgttt
ttgatggaagatgcaagtgtcgttgtcgctacaattgctttcggaatgggaattgacaag
ccagatgtacgttttgtaatgcattacgatatgccaaaatcgttagaaagttattaccaa
gaaactggtcgtgcaggtcgcgatggtggtgaaggtgtttgtattgctttctatgattat
aaagatatcgaaaagttagaaaaattcttagcaagtaaacctgttgcagaacgcgaagtt
ggaatgcaattactttctgaggttgtagcatatgccgaaacttcgatgtcgcgtcgtaaa
tttttgttacattattttggagaagaatttgacgacaaaaacggcgaaggggcaaatatg
gacgacaatatgcgcaatcctaaaaaaatgattgaggcaaaagttgatgcagtaattgca
ttagatgttgttcagaaaacaaatcaaaaattaaaattaaatgatgttgtaaatgttata
gttggtaaagaaacttctattacaaaatcatataatttgagctctgaagatttcttcgga
attggaaaagcaaaagaagattattattggaaatctattttacgccaattaattgtacgt
aatttattagagaaagaaatcgaatcatatggtattttaaaaattaccaaatctggaaaa
gatttcattagtaagccaacttcttttgaaattgccgaagatattgatttcaaaaaatta
ttatcagaaggtagctttgaaaaagaagaaacatcttctgcacctattgcttttgatgat
gttttattgaaacaattgaaagatttacgtaaaaaaatctctaaaaaacatcaaattcca
ccttttgcagttttccaagattcgagtttagatgatatgacaatgcaatatccaacaaca
gttaaggagttaacaaatgtatttggtgttggagaaggaaaagctcagaaattcgggaaa
gaatttgtagattttattgcgcaatatgttaaagacaacgacattattcgacctgaagat
atggtgattaaacaagttgctgacaaatcgagtcacaaagtttatatcattcaatcgaca
gacagaaagttaaatcttgaagatgttgcggaagcaaaaaatatgacgatgagcgatttg
ctttcagaaatggaaagtatcgtttatcaaggaacaaaattaaatatcaattattacatt
gacgaagttttggacgaagatcaacaagaggaaatttatgaattcttgatggacgcagat
tctgactcaatgtcatcattgttagatgaatttggtgacgattatgatgaagaagaatta
cgtttaatgcgtatcaaattcatcagtgaagtcgcaaattaa
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