Enterococcus faecium Aus0085: EFAU085_01282
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Entry
EFAU085_01282 CDS
T02788
Name
(GenBank) DEAD_2 helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
efau
Enterococcus faecium Aus0085
Pathway
efau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
efau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EFAU085_01282
09124 Replication and repair
03420 Nucleotide excision repair
EFAU085_01282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efau03021
]
EFAU085_01282
03036 Chromosome and associated proteins [BR:
efau03036
]
EFAU085_01282
03400 DNA repair and recombination proteins [BR:
efau03400
]
EFAU085_01282
Enzymes [BR:
efau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EFAU085_01282
Transcription machinery [BR:
efau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EFAU085_01282
Chromosome and associated proteins [BR:
efau03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EFAU085_01282
DNA repair and recombination proteins [BR:
efau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EFAU085_01282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
IstB_IS21
PhoH
ARM_TT21_4th
AAA_30
DUF6228
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AGS75236
LinkDB
All DBs
Position
1296200..1298575
Genome browser
AA seq
791 aa
AA seq
DB search
MIKQSKISVRHLVEFILRRGSIDNRKKSNHTALEGARIHRKLQKDAGENYEKEVFLKTTV
QLDEYYLIVEGRADGIFKRDGIYYIDEIKTSEPRFEDLEPEQVELFFHQARVYAYIYSQE
HDLQEINLQLTYFQTAEEVITRKVEHQTREQLETFFKKLTEDYKEWLVFQENWRTVRNAS
LMALKFPHDEYRKGQRELAVAAYKTIRTKQKLFVEAPTGTGKTISTLFPALKAVGEEEGE
KIFYLTAKTITRQVAEDAMTALKDTGAEVKSVTLTAKDKICFLDETTCNPDQCPYANGYY
NRINEGLWDLLNHENQITREVIETYARKHTLCPFELSLDVSIWCDVIIGDYNYLFDPTVY
LRRFFEDEKNEDYLFLIDEAHNLVNRSREMYSAELSYEKTKRSKEAIPKEFKKLHRRFNK
LLKEFDSIREIAKEDHWDYHHQKAPAESLVKAGYQLSEKIKEWLAEFPEHPSQEQLLPYY
FDLLHFLKVSEFYDDHYETTVEKTYRDLIVKEFCIDPSLFLEQSLDKGKSSILFSASFSP
LSYYQETLGGQKSLAYKLPSPFPEGNQQVFIANYLETTYRKREHSLAKLVETIHAFADGK
VGNYFVFFPSYQYLDLAVEAFRQQYPDSNVLIQETDMNEEERERFLTKFQTNPAETLIGF
CVLGGIFSEGIDLRGDRLIGSMIVGVGLPQMNHEQELIKSYYDEKEHLGFAYAYQLPGMN
KVLQAGGRVIRGMADQGIVVLADQRFSSFSYRRLFPQHWQTAREVRSVGELEEGIQRFWL
SKEAVNQKNEE
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacagtcaaaaatatctgtgcggcacttagtagaatttattttgcgacgtgga
agtatcgacaatcgtaaaaaaagtaaccatactgcattagaaggagcgagaatccaccgc
aagctccaaaaagatgcgggagaaaactatgaaaaagaagtctttttaaaaacaacagtt
caattagatgaatattacctgatcgttgaaggccgtgcagacggtattttcaaaagagac
ggtatttattatatagatgaaatcaaaacctccgaaccacgatttgaagatttagaacca
gaacaagtggaacttttctttcatcaagcaagggtgtatgcctatatctatagtcaagaa
catgatttacaagaaataaatctgcaattgacttacttccagacggcagaagaagtgatc
acgagaaaggttgaacatcagacaagagagcagttagaaactttttttaaaaagctgact
gaagattataaagaatggcttgtttttcaagaaaactggcgcactgtacgcaatgcctct
ttgatggctttgaaattcccccatgatgagtataggaaaggtcagcgtgaactagcggta
gctgcttataaaacgatccgtacgaaacagaaattgtttgtagaagcacctaccggaaca
ggaaaaacaatctctacgttattccccgctttgaaagctgtaggggaagaagagggagaa
aagatcttttatctaacggctaaaacaataactagacaagtagctgaagatgctatgaca
gcattaaaagatacaggagctgaagtaaaaagtgtcactttgacggcgaaagacaagatc
tgctttttagatgagacgacctgtaatccagatcagtgcccatatgccaatggttattac
aatcggattaatgaaggtttatgggatcttttgaatcatgagaatcagatcactcgtgaa
gtcatcgaaacttatgcaagaaagcatacactttgtcctttcgaactatcattagatgtc
agtatctggtgtgacgtaatcattggggattacaattatttatttgatccaactgtttat
ttaagacgtttttttgaagatgaaaaaaacgaggactatctgtttttgattgacgaagca
cataatttggtgaatcgttcccgagagatgtattcggcagaactatcttatgaaaaaacg
aaacgaagtaaggaagctataccaaaggaattcaaaaaacttcatcgccgtttcaacaaa
ctattaaaagaatttgattcgatccgagaaatagcaaaagaagatcattgggattatcat
catcaaaaagcaccggctgaatctttagtaaaggcaggttatcaattaagcgaaaaaatt
aaagaatggctggcagaatttcctgagcacccatcacaagaacaattgcttccttattat
tttgatttgcttcattttttgaaggtcagtgaattttatgatgatcactacgaaacaaca
gtcgaaaaaacgtatcgcgatctgatagtaaaagagttttgtattgatccaagcttgttt
cttgagcagtcgttggataaaggaaaaagcagtattcttttttctgctagtttttcacca
ctctcttattatcaggaaacactggggggacaaaaaagtctggcttacaaactgccgagt
cctttcccagaaggaaaccagcaagttttcatcgcaaattacctagagacgacttatcga
aaaagggaacacagtctggcaaaattagtagagacgattcatgcttttgctgatggaaag
gtcgggaattatttcgttttctttccttcttatcaatatttagatcttgcggtggaagca
ttcagacagcaatatcccgacagcaatgtgctaatccaagaaacggacatgaatgaggaa
gaacgcgaacgatttttaacaaaatttcaaacaaatcccgctgaaacattgattggattt
tgcgtacttggcgggattttttcagaaggaatcgatttgagaggggaccgattgatcggc
agtatgatcgtaggtgtaggtttgccgcagatgaatcatgagcaggaactgatcaaatca
tattatgatgagaaggaacaccttggatttgcttacgcttatcagcttcctggaatgaac
aaagtcttgcaagctggtggtcgagtgattcgtggcatggcggatcaaggaatcgttgta
ttggcagatcaacgattttctagtttttcttatcgacgtttattcccacaacattggcaa
acagcaagagaagtacgaagtgttggggaattggaagaaggaatacagcgtttttggtta
tcaaaagaagcagtaaatcaaaaaaacgaggaatga
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