Enterococcus faecium Aus0085: EFAU085_01304
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Entry
EFAU085_01304 CDS
T02788
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
efau
Enterococcus faecium Aus0085
Brite
KEGG Orthology (KO) [BR:
efau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efau03400
]
EFAU085_01304
Enzymes [BR:
efau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EFAU085_01304
DNA repair and recombination proteins [BR:
efau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EFAU085_01304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_12
ApoC-I
AAA_30
nSTAND_NTPase5
AAA_16
DUF16
DUF8048
Motif
Other DBs
NCBI-ProteinID:
AGS75258
LinkDB
All DBs
Position
1316528..1320250
Genome browser
AA seq
1240 aa
AA seq
DB search
MNQIPLKPQNERFTDDQWQAIFDQGDNLLVSASAGSGKTTVLVRRVIEKLKMGFDIDELL
IVTFTEAAAREMKERIQEALQESVNSESDPVRRQHFTKQLVLLPTANISTLHAFCLTVIR
RYYYLIDIDPVFRMLTDETETILMKEDVWDELREALYAENDERFFQLTMNFSNDRSDDGL
TNLVFSLYEFARANPDPQKWLEQLSDNYRLPEGLAKSRLYQKQIRPLVLADIYQCVQLYE
QMTQLAQGEGLEKMHEQVAGEQQQIKNIYEAFSQDRLEEAYAGLEQLTFSTFKSSRKAEL
KEISNEVKGMRDKAKKLIQQISKSYFPVSPSQMEELTDKALPLVEEMTKVTQSFMDGFSM
RKREKGVLDFNDLEHLALQILTEKTKDVWLPSEASKHYRKKFKEVMVDEYQDVNQLQEAI
LYWLREPDDTKGNMFMVGDVKQSIYSFRLADPSLFIGKYENFSKKEGGRRIVLAENFRSR
KEVLSFTNLIFEQLMDPAVGQINYDEAAKLIQGFSDFPENEQFEPEIMIYEKEQEESEIE
IPTDDILEDKTEGELFMTGLKIRQLIDSSFMIYDKKSKKSRPIEYKDIVLLTPTKKNNLT
ILEIFKTLDIPLEMNDAQNYFQATEIRTMISLLQLIDNPYQDIPLAAVLRSPIVGLIEPE
LASIRLANRAHTYYDAVLAYQASNEDELAAKLEHFGKQLEHWRELARRSSITDLLWDIYY
ETGYLEYVVGLPAGAQRQANLYALVDRAKAYEQSSFRGLYQFVRFIEKMQEKDKDLAEPV
ISIEDNAVRVMTIHASKGLEFPVVFLLDMTKEFNLQDLRNRYAFEEKLGAGIRYMDPETR
VLYDTLPFQAIKLAKQNKLLSEEMRKLYVGLTRAEQKLFIVGSYKNKEQMIQTWSEAADH
EELVFDPALRLKGRSSLMNWIGYGLIRHPEMQKYLEEEISTSLLQHSNAQFSISWMNQQS
IIEQRQLLAEKELVNLDQQMKEDETLLADSLQKRLAYEYPYQASSQTTSYQSVSEIKRLF
EDPDDTQESRLTLESSQNKAASRQFRYTQEQLAEPKFLQKDRQVSAAAVGTATHALLQLL
PLEMPTTESIHQKLQELVRKRLVDEKVAKKVDVSSIIWFFQTELGQQLIANKENVKREQP
FSMLLPADEVFQDYPNQEDELLIHGIVDGYLEEKDHLNIYDFKTDFILHPDDPAEIDAIV
QKYQGQLRLYQQAMSEALNKPVENVFLILLRVKQIININK
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcaaattcctttaaaaccgcaaaatgaacgattcacagatgatcagtggcaagcg
atttttgatcaaggagataatctattagtctctgcgtctgccggatcaggtaaaactaca
gtgcttgttcgaagagtgattgaaaaactaaaaatgggttttgatatcgatgaattattg
attgtgacatttactgaagctgccgcaagagaaatgaaagaaagaattcaagaggcatta
caagaatccgtcaatagcgaaagtgaccctgtacgtagacagcattttactaagcagtta
gttttattgcccacagcgaatatctcaaccttacatgctttttgcctgacagttattcga
cgttattattacttaattgatattgatccagtctttcgcatgttaacagatgaaacagaa
acgatcttgatgaaggaggatgtgtgggacgagctgagagaagcactttatgcagaaaat
gatgaacgatttttccaattaacaatgaatttttctaatgatcgttcagatgacggcttg
acgaatctggtgttttctctttatgagtttgcccgtgccaaccctgacccccaaaaatgg
ctagaacagttaagcgataattatcgtttgcctgaggggctagcgaaatctcgattatat
caaaaacaaatccgtcctttagttttggcagatatataccaatgtgtacagttatatgaa
cagatgactcagttagcacaaggtgaaggattagaaaaaatgcatgagcaagtagctgga
gaacaacagcagatcaagaatatctatgaagcgttctcgcaagatcggttagaagaagct
tatgctggtttggaacaactaactttttcaacttttaagagcagtcggaaagcagaattg
aaagaaatttccaatgaagtcaagggcatgagggataaagcaaaaaaactgattcagcag
ataagtaaaagttattttcctgtttccccaagccaaatggaagaattaacggacaaagca
ctaccgttagtcgaagaaatgacaaaagtcacgcaaagcttcatggacggtttcagtatg
cgtaaacgggaaaaaggtgtgctggatttcaatgatctggaacatttagcgttgcagatt
ctcacagaaaaaacgaaagatgtatggctgccaagtgaagcttcaaaacattatcgaaaa
aaattcaaagaagtaatggtagatgaatatcaagacgtgaaccaattacaagaagccatt
ttatactggctaagagaacccgatgatacaaaaggaaatatgttcatggttggggatgtc
aaacaatccatctattctttccgtttagcagatcctagtttatttatcgggaaatacgag
aatttctcaaagaaagaaggcggacgtcgaatcgttttggctgagaacttccgctctaga
aaagaagtcctttcttttacgaatcttatttttgaacaactaatggatccagcagtgggt
caaatcaattatgacgaagcagccaaactgatccaaggattttcagactttccagagaat
gaacagtttgagccggaaatcatgatctatgaaaaagaacaggaagaatcagagattgag
attccgacggatgatatactggaagacaaaacagaaggcgaactttttatgacaggacta
aaaattcgtcaattaattgattcctcctttatgatttatgataaaaaatcaaaaaaaagt
cgtccgatagagtacaaagacattgttctcttgacacctacaaagaagaacaacttaacg
attttagagattttcaaaacattggatattccattagagatgaatgatgctcaaaactat
tttcaagcgacagaaattcgcacgatgatctcgctgctacaattaatcgataatccctat
caagatattccgcttgcggctgtattgcgctcaccgatcgtgggtctgattgaaccagaa
ttagccagcattcgattagctaaccgtgcacatacttactatgatgctgtgcttgcttat
caagcatcaaacgaagatgaattagcagctaagctggaacattttggcaagcaactagag
cattggcgagaacttgctcgccgttcttcgatcactgacttgttatgggatatctattat
gagacgggatatctagagtatgtggtcggtctgccagcaggggcacagagacaagccaat
ctttatgcattggttgatcgtgccaaagcttacgagcaaagttctttcagaggattatac
cagttcgtgcgtttcattgaaaaaatgcaagaaaaagataaagacttagcagaaccagtc
atttcaatagaagataatgctgttcgcgttatgacgatccatgcaagtaaaggcttggaa
ttcccagttgtatttttgttagatatgacaaaggagttcaacttacaagacttgcgcaat
cggtatgcttttgaagaaaaacttggagcaggaattcgctatatggatcctgaaacacga
gtgttatatgatacgttaccgtttcaagccatcaaattggcaaagcaaaacaaattgttg
tcggaagaaatgcgtaaattgtatgtaggattgactcgggcagaacaaaagcttttcatt
gtcggttcctataaaaataaagagcaaatgatccaaacgtggtctgaagcagctgatcat
gaggagttagtttttgatcctgcgctacgtttgaagggcagaagcagcttgatgaattgg
attggttacggattgatccgtcatcctgaaatgcagaaatacttagaggaagaaatttcg
acttctcttcttcaacattcaaatgcacagttttctatttcatggatgaatcagcaatcg
atcattgaacaaagacagttgcttgctgaaaaagaactggttaacttagatcagcagatg
aaagaagatgaaactttattagcagattcgttacaaaaacgtctggcatatgaatatcct
tatcaagcttcttcacaaaccacaagttatcaatctgtatctgaaatcaaacgattattc
gaagatccagatgatacacaagaatcacgtttgactctggaaagcagtcagaacaaagca
gcatcccgtcaatttcgttatacgcaagaacaactagcagaaccaaaatttttgcaaaaa
gatcggcaagtgtcagcagctgctgttggaactgctacgcatgctttgttacaattactg
ccattagagatgccaactacagagagtatccatcaaaaattacaggaattggtaaggaaa
cggttagtagacgaaaaagtcgcgaaaaaagtagatgtttcttctattatatggttcttt
caaacagaacttggtcaacagctgattgccaacaaagaaaacgtaaaacgagaacaacct
ttttccatgctgcttcctgctgacgaagtatttcaagactatccaaatcaagaagatgaa
ctattaatccacggaatcgtcgatggatacctagaagaaaaagatcatctcaatatctat
gattttaaaacagattttattttacatccggatgatccagcagaaatagatgcaatcgtc
caaaaatatcaaggacagctaagactttaccaacaagcaatgtcagaagctttgaataag
ccagtagaaaatgttttcctaattttgcttcgagtgaaacaaattataaacattaacaaa
taa
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