Enterococcus faecium Aus0004: EFAU004_00218
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Entry
EFAU004_00218 CDS
T01772
Name
(GenBank) DEAD-box ATP dependent DNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
efc
Enterococcus faecium Aus0004
Pathway
efc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EFAU004_00218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efc03019
]
EFAU004_00218
03009 Ribosome biogenesis [BR:
efc03009
]
EFAU004_00218
Enzymes [BR:
efc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EFAU004_00218
Messenger RNA biogenesis [BR:
efc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EFAU004_00218
Ribosome biogenesis [BR:
efc03009
]
Prokaryotic type
rRNA helicases
EFAU004_00218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFC62304
LinkDB
All DBs
Position
213521..215032
Genome browser
AA seq
503 aa
AA seq
DB search
MKFKELELSPELLKSVERAGFEEATPIQAETIPLALAGKDVIGQAQTGTGKTAAFGLPML
EKIDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRP
HIVVGTPGRMLDHINRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISQVPDQRQTLLF
SATMPPAIKNIGVKFMKNPHHVKIKAKEMTADLIDQYYVRAKEYEKFDIMTRLFDVQTPE
LTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKSGHLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMDYLHVIENLTKK
RMTTLRPPTEKEAFKGQLGAAVEQIETKLAENGLDKYLQTADKLLEEYSAQDLVALLLKT
TAKDPADAVPVKITPERPLPMQKKGYNKNGKRGGGNNRNRRDGGNYRGNKSKGGYSKNNN
SQKDGGKRHNDKKRGFVIRSNND
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttaaagaactagaattatcaccagaattgttgaaatcagtcgaacgcgctggt
tttgaagaagcaacgcctatccaagcagaaacgattccactagcattagctggaaaagac
gttattggacaagcacagacaggtacagggaaaacagctgcatttggattaccaatgtta
gaaaaaatcgatccagatcgtcacgaattacaaggtttagttatcgcaccaacacgtgaa
ttagctatccaaacacaagaagaattatatcgtttagggcgcgacaaaaaagtacgtgta
caagccgtttacggcggagcagatattggccgtcagatccgtggcttgaaagatcgtcca
catatcgttgtgggtacaccaggacgtatgcttgaccacattaaccgccacacattgaaa
cttggaaccgttcaaacattagttttggatgaagcagatgaaatgttgaatatgggcttc
ttggaagatatcgaaaaaatcatttcacaagttcctgatcaaagacaaacattacttttc
tcagcaacgatgccgccagctatcaagaatattggcgttaaattcatgaaaaatccacat
catgtgaagatcaaagcgaaagaaatgacagctgacttgatcgatcaatactatgtccgc
gcaaaagaatacgaaaaattcgatatcatgactcgcttgtttgatgttcaaacacctgaa
ttaacaatcgtcttcggacgtacaaaacgccgtgtagacgaattggcacgcggattagaa
gcacgcggttaccgtgcagaaggaatccatggcgatttgtctcaacaaaaacgaatgagc
gtattgcgttcatttaagagcggtcatttagatatccttgtagcgacagacgttgctgca
cgtggattagatatttcaggtgtcactcatgtgtacaactatgatatccctcaagatcca
gaaagctacgttcaccgtatcggacgtacaggccgtgccggaaaaggcggtatgtctgtg
actttcgttacaccaaatgaaatggactacttgcatgtgattgaaaacttgacgaaaaaa
cggatgacgactttacgtccaccaaccgaaaaagaagcattcaaaggtcaattaggtgct
gcagttgaacaaatcgaaacaaaacttgcagaaaatggtctagataaatacctgcaaaca
gcagataaattattagaagaatattctgcacaagatttagttgcacttttgctaaaaacg
acagcaaaagatccagctgatgcagtgccagtgaagatcacaccagaacgcccattgcca
atgcagaaaaaaggatacaataaaaatggcaaacgtggtggcggaaacaaccgtaatcgt
cgtgacggcggtaattatcgtggaaacaaatcaaaaggcggttatagcaaaaataataac
agccaaaaagatggcggtaaacgtcacaatgataaaaaacgcggatttgtaatccgttca
aataacgattaa
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