Enterococcus faecium Aus0004: EFAU004_01014
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Entry
EFAU004_01014 CDS
T01772
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
efc
Enterococcus faecium Aus0004
Pathway
efc03410
Base excision repair
efc03430
Mismatch repair
efc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EFAU004_01014 (recJ)
03430 Mismatch repair
EFAU004_01014 (recJ)
03440 Homologous recombination
EFAU004_01014 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efc03400
]
EFAU004_01014 (recJ)
DNA repair and recombination proteins [BR:
efc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EFAU004_01014 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EFAU004_01014 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EFAU004_01014 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFC63099
LinkDB
All DBs
Position
complement(1034362..1036659)
Genome browser
AA seq
765 aa
AA seq
DB search
MRQANFDWKLSETEPSESFLQMIRELKLSPFVGKLLWQRGYHEEKDINRFLHPKEQELHD
PYLIHDMDKAISRIQEAVISGEKILVYGDYDADGITSATVMKETLELLGAEVEVFLPNRF
EHGYGPNQSVYQEKIEEGIQLIITVDNGVAGNDAVAYAQQAGVDVIITDHHELPENLPDA
YAIVHPRHPAGHYPFPDLAGVGVAFKVASALLEEPPAEFLDLVAIGTIADLVSLTDENRI
LVSLGIDAIHHSERIGLQALFEESGVKMRDADETTIGFSIAPRLNAIGRMGDPRPAVSLL
ATFDEEEASVQAKKLNEINEERKAIVEQITQEALAMVNKENHIHLLVNRGWHEGVLGIVA
GKIMNETGKPTLVLTLKEDGSAKGSGRSIEALNLFEMLDQMRDLFTYFGGHHAAVGLTMP
SENVTILQEKMNQYIVDHQIDLMRGPELRIDEVLLPNEVTVERIDELKLLAPFGTDNPLP
QFLFRQVQAENIKRIGANQQHLKFVLSDASSQLDAVAFGFGTQEEELLNNQVDVVGKLSI
NEWNGRKKPQLMVSDFSVGGLQVFDWRAKRFREQSRTSEGSLYLAFDSSTLKFVPEIIQE
AAIVFEGLDSVKAIIEKRKPNSLVVMDCPDDLADLKEVFRSYSFNRVYLMGISPDEAYLN
GVGTREQYAKLFKLIHSQERIDIRHKIKAIAQYLRIPEKLLIFMIQVFFELKFVTIENGV
LQKVASPESHPLTESRLYQRRLNKIKVEEFLLLSDIPTIKKWLTT
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
gtgagacaagcaaattttgattggaagttaagcgagacagagccttctgaatcctttctc
caaatgatccgtgaactgaaattatctccatttgtcggtaagttactgtggcaaagaggt
taccatgaggaaaaggatatcaaccgatttttacatccaaaggaacaagaattacatgat
ccgtatctgatacacgatatggataaagcaatcagccgaatccaagaagctgtaatcagt
ggagaaaaaatcctcgtttacggtgattatgacgcagatgggatcaccagtgcaacggta
atgaaagaaacactggaattacttggtgcagaagtagaagtattcctgccaaatcgattt
gagcatgggtatggaccaaaccaatcggtataccaagaaaagatcgaagaaggaatccag
ttgatcatcactgttgataacggggtagcaggaaatgatgcggtagcatacgctcagcaa
gctggtgtagacgtgatcattacagatcatcacgaactacctgagaatttaccagacgct
tatgcgattgttcaccctcgtcatccagcggggcactatccatttccagatttggcagga
gtcggagtagcattcaaagtagcttctgcattattggaagaaccgcctgcagaatttttg
gatttagtagcgataggaacgatcgccgatttagtttcattgactgatgagaatcgaatc
cttgtttcattaggaatcgatgccattcatcattcagaacggataggacttcaggcgcta
tttgaagaaagcggcgtaaaaatgagggacgcagacgaaacaacgatcggtttttcgatt
gctcccagactaaatgcaatcggtcggatgggcgatccacgtcctgccgtctcgttactt
gcgacgtttgatgaagaggaagcatccgttcaagcaaaaaaattgaatgagatcaatgaa
gaaagaaaagcaatcgtagagcagataacacaagaagcattagcgatggtcaataaggag
aatcatatccatctattggtaaaccgaggatggcatgaaggcgttttgggcattgttgct
gggaaaataatgaatgaaacgggtaaaccaacgcttgtccttactttaaaagaagatgga
tcagctaaaggatctggacgtagtattgaagccttgaatctttttgaaatgcttgaccag
atgcgagatttatttacttacttcggaggacatcatgcagcagtcggtttaacgatgcca
agtgaaaatgtcactatactacaggagaagatgaaccaatatatagtcgatcatcaaatt
gacttgatgagagggcctgagttgagaattgatgaagtattgctgccaaatgaagtaaca
gtagagcgaattgatgagctgaaactattggcgccatttggtacggataatcctttgcct
cagtttttatttcgacaagtccaagcagaaaatatcaaaagaatcggagcaaaccaacag
catctgaaatttgtcctttccgatgcatcgagtcagcttgatgcggtcgcttttggtttt
ggtactcaagaagaagaactgctgaataatcaggtagatgtggtaggaaagctttcgatc
aatgaatggaacgggcgtaagaaaccgcagctgatggtatctgatttttctgtgggtggt
ctgcaagtatttgattggcgggcaaaacgtttccgtgaacagagccgaacgtcggaaggt
agcctttatttagcatttgattcttcgacgttgaaattcgtgcctgagattatccaggaa
gctgcgattgttttcgaaggactagattctgtaaaggcaataattgaaaaaagaaaacca
aactctctagttgttatggattgtccagatgatttagcggatctgaaagaagtttttcgg
tcttattcattcaatcgtgtttatctgatggggatttcacctgatgaggcctatttgaat
ggggtaggcacaagagaacagtacgcaaaattgtttaaattgatccattctcaagaacga
attgatatacgtcataaaataaaagcaatagctcaatatttgcgtatccctgaaaaatta
ttaatttttatgatacaggtgttttttgaattgaaatttgttacaatagagaacggtgtt
ttacaaaaagtcgctagcccagaaagtcatcctttgactgagagcagattataccagcga
cggctcaataaaatcaaagttgaggaatttttgcttttgagcgatattcctaccataaag
aaatggttaacaacctag
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