Enterococcus faecium Aus0004: EFAU004_01293
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Entry
EFAU004_01293 CDS
T01772
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
efc
Enterococcus faecium Aus0004
Pathway
efc03030
DNA replication
efc03430
Mismatch repair
efc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EFAU004_01293
03430 Mismatch repair
EFAU004_01293
03440 Homologous recombination
EFAU004_01293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efc03032
]
EFAU004_01293
03400 DNA repair and recombination proteins [BR:
efc03400
]
EFAU004_01293
Enzymes [BR:
efc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EFAU004_01293
DNA replication proteins [BR:
efc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EFAU004_01293
DNA repair and recombination proteins [BR:
efc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EFAU004_01293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HHH_3
HROB
Motif
Other DBs
NCBI-ProteinID:
AFC63377
LinkDB
All DBs
Position
complement(1334951..1338265)
Genome browser
AA seq
1104 aa
AA seq
DB search
MFFPQLYTITSYSLLQSTIRIREYVQEAKKQGYTSLAITDKDVLYGAPEFYRICVEEGVQ
PIIGLHLSYTYEEKNYGLLAYAKDEIGYQQLMKLSSRKMIQEKLELAEMTETDHLAFVVP
ANHSVSEAFNKEDNFFGHWQFLLENVFTRNFYIGLTENTPDQLPEWYQYVIKENYSLCAL
HPIASLQQEELFALEVMKHIKEGSQIPLENLSASLPLTANVYLLSEQEMIKRFEKAGLSQ
AVIGAQRLAESISFEFQFHQKLLPHYPVPNGKQAGEYLRELCYSQVERRITDYTKEYQER
LDYELSVIHQMGFDDYFLIVWDVMAFAHRNKIVTGAGRGSAAGSLVAYVLEITDVDPLEY
DLLFERFLNPERFTMPDIDLDIPDNRREEVLNYVREKYGQYHMAQIATFGTMAAKMVLRD
AARVFGLSQSEANRWSKAIPNQLKITLTQAYKTSHQLVELVQASEKNQLLFKTAVILEGL
PRHVSTHAAGVVISDKNLLELVPLQRGSDEAFLTQYTMNEVEAIGLLKMDFLGLRNLSII
DFTLKAVKRVEGYEIRLKEIPLNDAKTLLLFQRGETSGVFQFESAGIRNVLRRLDPENIE
DIAAVNALYRPGPMQNIDTFIARKKGKEAIRYPDDSLIPILKNTYGVIVYQEQIMQIAST
MAGFTLGQSDILRRAVSKKKKDVLDEEKSHFVSGALQQGYSEKTAATVYEYIEKFANYGF
NRSHAFAYSFVGFQMAYLKAHHPGAFFTSLMNSVRHNTSKLKEYIAEARKNKLKLSSPSI
NQSNSSFELVNKEEIRFGLTAIKGIRRDFVEDILNERKQNGPFQSVDQFLIRIDKRWLKL
ELLQSLTAVGVFDELSPNRKQLMLDLEGKIQNIVYSGGSLDLLGIMALKEEEVADYTLEE
RLKLEEEYLGIYLSGHPAEGFDRLRLAKQVQLITDIVPNQPVNLLVMIKEVREIRTKKGE
LMAFVEGTDSSGEISVTVFPTLYRKYRNLFAVDRVIFVQGRSEISKYNQELQLIGESFAD
PNQLEAQYPSQTCYLRITEEREDPEIMKQLQVIFQKHPGYIPVVMYHEKTQRKVVLSDAY
WVDDSKSIKRQLIYLLGEDNVVFK
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcccacaactttatacaattacttcttattctcttttacaaagtacgatacgt
attcgagaatatgtacaagaagcaaaaaaacaaggctacacttcattagccataacggat
aaagatgtcttatacggtgcacctgaattctatcgtatttgtgtagaagaaggagtacag
ccaatcattggattacatcttagttatacttatgaagaaaaaaattatggcttgcttgcg
tacgcaaaagatgaaataggttatcagcagctgatgaaactttccagccgaaaaatgatc
caagaaaaattggaacttgcagaaatgacagaaaccgaccatctagcgtttgttgttccg
gcaaatcattctgtttctgaggctttcaataaagaggataactttttcggtcattggcag
tttttacttgaaaatgtttttactagaaatttttatatcggcttgacagaaaacacgcct
gatcaattgcctgaatggtatcagtatgtgataaaagaaaattattcgctttgtgcatta
catcccatcgctagtttacaacaagaagaactttttgcacttgaagtgatgaaacatatc
aaagagggaagccaaatacctttagaaaatttatctgcatctttaccactaacagcaaat
gtctatcttctttcagaacaagaaatgatcaaacgattcgaaaaagcgggtctttcccaa
gctgtaataggcgcccagcgtttagctgaatcgatttcatttgaattccagttccatcag
aaattacttccgcattatccagttcctaatggaaaacaagctggagaatatttaagagag
ttatgctattcgcaagtggaacgccgaatcactgactatacaaaggaataccaagaacgt
ttggactacgagttatctgtcatccatcaaatgggattcgatgattatttcttgatcgta
tgggatgtaatggcttttgctcatagaaacaaaatcgttaccggtgcaggtcgtggttct
gctgcgggttcattagtagcctatgtgttagaaatcacagatgtggatccattagaatat
gatttgctgttcgaacgctttttaaaccccgaacgctttacgatgccagatatcgatttg
gatattcctgacaatcgacgtgaagaagtattgaattatgttcgagaaaagtatggacaa
tatcatatggcacaaatcgcaacatttggcacaatggcagcaaaaatggttcttagagat
gcagctagagtgtttggtttatcgcaaagtgaagcaaaccgctggtcaaaagcaataccc
aatcaattgaaaatcacattgacccaagcttataaaacttcgcatcaattagtagaatta
gttcaggcaagcgaaaaaaaccaacttttattcaaaactgcagtgattttagaaggattg
ccaagacatgtttcgactcacgcagcaggtgtagttatcagcgataagaatctacttgaa
ctagttccgctccaacgcggttctgatgaagcttttctgacccagtatacgatgaatgag
gtagaagcaatcggtcttttgaaaatggactttttaggactacgcaacttatcgattatt
gattttactttgaaagctgttaagcgagtagaagggtatgagatccgattaaaagagatc
ccgctaaatgatgcaaaaacgctgctcttgtttcaacgaggcgaaacctcaggagtattt
caatttgaatctgctggtatccggaacgttttacgaagattagatccagaaaacatcgaa
gatattgccgcagtcaatgcattgtatcgaccaggccctatgcaaaatatagataccttc
attgccaggaagaaaggaaaagaagccattcgctacccagatgattcactgatcccgatt
ttgaaaaacacatatggagtgatcgtctatcaggaacaaatcatgcagatcgcctcgact
atggctggatttacattagggcagtcagatattctgcgacgggcagtgagtaaaaagaaa
aaagacgtattagatgaagaaaagtcgcattttgtatcaggagcattacaacagggatat
tcggaaaaaacagcagcgaccgtatatgaatatatcgaaaaatttgcaaactatggattc
aatcggtcacatgcatttgcttattcattcgtgggattccaaatggcgtatctaaaagcc
catcatccaggtgctttctttaccagcctgatgaattctgttcggcataacacatcaaaa
ttgaaagaatatattgcagaagcacgtaaaaataaactcaaactttcctcgccgtccatt
aatcaaagtaattccagttttgagttggtcaataaggaagaaatcagattcggactgaca
gcgataaaaggtattcggcgtgattttgtagaagatatattaaacgaaagaaaacaaaat
ggcccgttccagtcagtggatcaattcctcatacggatcgataagcgttggctgaaatta
gagttactgcaatcactgacagcagtaggagtttttgatgaattatctcctaacaggaaa
caattgatgcttgatctcgaaggaaaaatccaaaatatcgtttacagtggtggaagtctt
gacttgctgggaatcatggcattaaaagaagaagaagtcgctgactatacactagaagaa
cgcttgaagctggaagaggagtacttaggtatttatttgtcaggtcatcctgcagaaggg
tttgatcgtcttcgtttagctaaacaagttcagctgattacagatatcgtccctaatcaa
ccagtcaatttattagtgatgatcaaggaagttagagaaattcggacaaaaaaaggagaa
ctgatggcctttgttgaaggaaccgacagtagtggagaaatttctgtcacagtttttcca
actctttatcgtaaatatcgtaatttgtttgccgttgatcgagtgatctttgttcaaggg
cggagcgaaatcagcaaatataatcaggaactgcaactaattggagaaagctttgctgat
cctaaccagttagaagcccagtatccttcacaaacttgctatttgcgtattacagaagaa
cgggaagatcccgagataatgaaacaattacaagtgatttttcagaaacacccaggatat
ataccagtagttatgtatcacgaaaaaacgcaacgaaaagtagttctgtcagatgcttat
tgggtggatgacagcaagagtataaagcggcaacttatttatctgcttggcgaagataat
gtggttttcaaataa
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