Enterococcus faecium Aus0004: EFAU004_01720
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Entry
EFAU004_01720 CDS
T01772
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
efc
Enterococcus faecium Aus0004
Pathway
efc03030
DNA replication
efc03430
Mismatch repair
efc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EFAU004_01720
03430 Mismatch repair
EFAU004_01720
03440 Homologous recombination
EFAU004_01720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efc03032
]
EFAU004_01720
03400 DNA repair and recombination proteins [BR:
efc03400
]
EFAU004_01720
Enzymes [BR:
efc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EFAU004_01720
DNA replication proteins [BR:
efc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EFAU004_01720
DNA repair and recombination proteins [BR:
efc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EFAU004_01720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
HHH_3
DNA_pol_A_exo1
DEDDh_C
Phage_zn_bind_2
Motif
Other DBs
NCBI-ProteinID:
AFC63804
LinkDB
All DBs
Position
complement(1743705..1748063)
Genome browser
AA seq
1452 aa
AA seq
DB search
MSEKRDLFEKLLEQIQLEEAEKNHPLLTAGEMDSVVVHRKSRLWEFTLHFSKILPIMLYR
SLTQHLTIAFKDIAQVKLNILADDQTFDEQLLQDYWAQALENQQCDTPLAQQVLKTQVPV
IKDRKVILPIDSTGAISYLKQQYLPLVEELFVSYGFPKFRIEPEVDEQQAERVLKLFEER
KQEQAEAFMKQAAESLVVHEQKKKERKEQSPALEGPIHIQLGRNIPADEPTTPMISIVEE
ERRVTLEGYVFDKEVRELRSKRKILTLKITDYTSSFIVKKFSNGEKDEQVFDAISVGSWL
KVRGSIQEDTFVRDLVMNAQDIIEVKHTPRKDYAPEGEKRVELHVHSNMSTMDATNSISD
LVAQAGKWGHRAIAITDHGGAQAFPEAHSAGKKAGVKILYGVEANVVDDGVPIAYNDAHE
ALSEATYVVFDVETTGLSAVYDTIIELAAVKMYKGNVIESFDEFIDPGHPLSRTTVDLTG
ITDGMVRGSKSEEEVLRMFLEFSKDTILVAHNAAFDMGFLNTSYARYGIPEAANPVIDTL
ELARYLYPQFKRFGLGVLSKKFGVSLEQHHRAIYDAEATGHLAWIFVKEAMDNHNMLYHD
QLNEHIGEGDSYKRARPFHVTILAKNQAGLKDLFKLISMSNVEYFERVPRIPRSQLKKMR
ENLLIGSACDKGEIFEAMMQKGVEEARNRAKFYDYIEVMPKAVYAPLIEQELVKNEHDLE
EIIQNLVEIGKSLDKIVVATGNVHYLNEEDAIYRKILINSMGGANPLNRHSLPDVHFRTT
DEMLTAFHFLGEETAKEIVVENTNKIADICEEVIPVKDELYTPKIPGSEDEISELSYTKA
KQMYGDPLPEIIQKRLKKELNSINGNGFSVIYLIAQKLVHKSNEDGYLVGSRGSVGSSFV
ATMTGITEVNPLAPHYYCPECQYSEFFEDGTYGSGFDMPEKQCPKCGARLNKDGHDIPFE
TFLGFHGDKVPDIDLNFSGDYQAEAHNYTKVLFGEDYVYRAGTIGTVADKTAYGYVKGYE
RDNNLQFRSAEVDRLAKGATGVKRTTGQHPGGIIVIPDYMDVYDFTPIQYPADDQNSEWK
TTHFDFHSIHDNVLKLDILGHDDPTVIRMLQDLSGIDPQTIPTDDPEVMRIFAGPEVLGV
SQEQIYSKTGTLGIPEFGTRFVRGMLEETHPTTFAELLQISGLSHGTDVWLGNAEELIRR
GDATLAEVIGCRDDIMVYLIHAGLDSGMAFKIMETVRKGQWNKIPDELRETYLSAMKENN
VPDWYIDSCSKIKYMFPKAHAAAYVLMALRVAYFKVYFPILYYCAYFSVRADDFDLVSMC
KGKDAVKQAMKEITDKGLDASVKEKNQLTVLELANEMLERGFKFGMIDLYKSDAVNFVIE
GDTLIAPFRAVPSLGTNVAKQIVEARKDGPFLSKEDLATRGKVSKTLIEYMNDNGVLKDL
PDENQLSLFDML
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagaaaaacgagatttatttgaaaaactgttggaacaaatccaactagaggaagca
gaaaaaaatcatccactgcttactgctggtgaaatggatagtgtagtggtccatcgtaaa
tcgcgtttatgggaatttacgctgcatttttccaaaattttgcctattatgctatatcgg
tcattgactcagcatctgactatcgcttttaaagatattgcacaagtcaaactgaatatc
ttagcagatgaccagacattcgatgaacagctcttgcaagattactgggcccaagctttg
gaaaatcagcaatgcgatacaccactagcacagcaagtattgaaaacgcaggtacctgtg
ataaaagatcgtaaagtcatcttgccaatcgacagtacaggagctatttcttatttgaag
caacaatacttgccattagtagaagagttgttcgtcagttacggattcccaaaatttcgt
atcgaaccagaagtggatgagcagcaagcggaacgagtattgaaactttttgaagaacgc
aaacaagaacaggcagaagcctttatgaagcaagcagctgaaagtctagttgtccacgaa
caaaagaaaaaggaaagaaaagagcaatcgccagctcttgaaggacccatccacatccag
ctaggacgaaatattccagccgatgaaccaacgacaccaatgatcagtatcgttgaagaa
gaacgaagagtcacacttgaggggtacgtattcgacaaagaagtcagagaactacgttca
aaacgcaagatcttgactttgaaaatcacagattatacttcatcatttatcgtcaaaaaa
ttctcgaacggcgaaaaagatgaacaagtatttgatgcgatcagtgtcggtagctggtta
aaggtacgaggaagtattcaagaagatacgtttgtccgtgatttggtcatgaatgcgcaa
gatatcatagaagtcaaacatacacctcgcaaagattatgctcctgaaggggaaaaacga
gtagagcttcatgttcatagcaatatgagtacgatggatgcaacaaacagcatctctgat
cttgtggcacaagcagggaaatggggacaccgagctatcgccattacagaccacggtggt
gcgcaagcctttccggaagcacatagtgctggaaaaaaagcaggtgtgaaaatcttatac
ggcgtggaagcgaatgtcgtagatgatggtgtcccaattgcttataatgatgcacatgaa
gcattgagtgaagccacatatgtcgtatttgacgtggaaacgacaggattgtctgcagta
tatgacacgatcatcgagctagccgcagtcaaaatgtataaaggaaatgtgatcgaaagc
tttgatgaatttatcgatccaggacatcctttgtcacgaacaacggtagatctgactggt
atcacggatggaatggttcgaggatcaaagtcggaagaagaagtattgcggatgttcctt
gaattttcaaaagatacaattttggtagcccacaacgcggcttttgatatggggttcttg
aatactagctacgcaaggtatggtattcctgaagcggccaatccagtcattgatacgttg
gaattagctagatatctgtatcctcaattcaaacgtttcggattaggtgtgttatctaaa
aaatttggtgtcagcttggaacagcatcaccgagcaatctatgatgctgaagcaactggt
cacttagcatggatctttgtgaaagaggcaatggacaatcataacatgctttatcatgat
cagctaaatgagcatatcggagaaggagattcttacaaaagggctcgacctttccatgta
acgattttagcaaaaaatcaggcaggactgaaagatttgttcaaactgatttcaatgtcg
aatgtcgaatacttcgaacgcgtcccacgaataccacgctcccaattgaaaaagatgcgt
gaaaatctattgatcggctcagcttgtgataagggagaaatattcgaagccatgatgcaa
aaaggggtagaagaggcaagaaaccgagcaaaattctacgattatattgaagttatgcca
aaagcggtctatgcgcctttgatcgagcaagaattggtaaaaaatgaacatgatttggaa
gaaattatccaaaatttggtagaaatcggaaaaagtttggataaaatcgttgttgcaaca
ggtaatgtacattatctgaacgaagaagatgccatttaccgaaaaattttgatcaattct
atgggcggagcgaatccgttgaatcgtcatagtttgccggatgtccatttccgaacaacc
gatgagatgctaactgcatttcactttttaggggaagaaacagcgaaagagatcgtagta
gaaaatacgaataaaatcgcagatatctgcgaagaagtgattccagtcaaagatgaactt
tatacaccgaagattccaggttcagaagatgaaatatcagaattgagttacacaaaagca
aaacaaatgtacggagatccgttacctgagatcattcaaaaacgattaaaaaaagagttg
aattctattaatggtaatggcttctcggttatttatctgatcgcccaaaaactagtgcat
aaaagtaatgaagatggctatctagtaggttcacgtggctctgttggctctagctttgtt
gcgacgatgacaggaatcactgaagttaatccgttagcccctcattattattgtccagag
tgccaatattccgagttttttgaagatggtacgtatggttctggatttgacatgccagaa
aaacaatgtccaaaatgtggtgcacgcttaaacaaagacggtcatgatattccatttgag
acatttttaggattccatggagacaaagtgcccgatattgatttgaacttctcaggtgat
tatcaagcagaagcccataactatacgaaagtattgtttggcgaagactatgtttaccgt
gccggaacgattggtacagtcgccgacaaaacagcatatggctatgtaaaaggatacgaa
agggacaataatctgcagtttcgaagtgcagaagtcgacagattagcaaaaggcgctact
ggagtcaaacggacaaccggccagcatccaggggggatcatcgttattcccgattatatg
gatgtctatgattttacgccgatccaatatccagcagacgatcaaaattcggaatggaaa
acgactcattttgattttcactcgattcacgataatgtattgaaattagatattctaggg
catgatgacccaactgttattcggatgcttcaagatttatcagggatcgatccacaaacg
atccctacggatgacccggaagtgatgcggatatttgccggtcctgaagtacttggagta
agtcaggaacaaatttattccaaaacagggacattaggtattccagaattcggcactcgt
tttgttcgagggatgctagaagaaacgcatcctacaacttttgcagaactactgcaaatt
tccggactatctcatggtacagacgtatggttaggaaatgcggaagaattgattcgacga
ggagatgcgacactggcggaagtaatcggctgtcgtgatgatattatggtttatttgatc
catgctggattagatagcgggatggcatttaaaatcatggaaactgttcgtaaaggacaa
tggaacaagatccctgatgaattgcgagaaacctatctatcggcgatgaaagaaaataat
gtgcccgactggtatatcgattcttgttcaaaaatcaaatatatgtttccgaaagcccat
gctgcagcttacgtattgatggctcttcgtgtcgcttatttcaaggtttatttccctatt
ttgtattactgtgcatacttttctgtacgtgcagacgactttgatctagtctccatgtgc
aaaggaaaagatgctgtgaaacaagcaatgaaagaaatcacggacaaaggattagatgct
tccgtaaaagaaaagaatcaactgacagtgctggagttagccaatgaaatgctggaacga
ggattcaaatttggaatgattgatttgtataaatcggatgccgttaactttgttattgaa
ggtgatacgttgatcgcaccatttagagctgtcccaagtttgggaaccaacgtggcaaaa
caaatcgttgaagcaagaaaagacggtccatttttatccaaagaagatcttgccacccgc
ggtaaagtttcaaaaacattgatcgaatatatgaacgacaatggcgtattgaaagatcta
ccagatgaaaatcaattatcgttattcgatatgctataa
DBGET
integrated database retrieval system
