Enterococcus faecium Aus0004: EFAU004_02078
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Entry
EFAU004_02078 CDS
T01772
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
efc
Enterococcus faecium Aus0004
Pathway
efc02020
Two-component system
efc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
efc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EFAU004_02078
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EFAU004_02078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efc03021
]
EFAU004_02078
Transcription machinery [BR:
efc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EFAU004_02078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
Sigma70_r4
HTH_3
LacI
DUF2661
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AFC64162
LinkDB
All DBs
Position
complement(2104103..2105437)
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AA seq
444 aa
AA seq
DB search
MKFEQNFSQKQQQTQKLAMTQQLQQSIQVLQYNSEELLAFVENQAMENPLVEVVEPEWQP
DYIKASSSSYEGEETNYLNQIPDTKGSLFDSLIEQVHLNYRDTFLRKIVLYLVEYIDLNG
FLTISLEEAGKEIGATPIQMLDALTLIQQLEPAGVGARSLQECLMLQTERDDYAPELAYI
VLEECFEELVERKWKEIAQRFSVDLHAVQQIFDYLQTLSPSPGRIFDRSSELYIIPDVRV
LVDDDKNVQVISNRKNQPNIRFQESYFKQMSQQADKETENYLKERKQEFEWLKKTILQRG
DTILRVAQVIVSRQKAFFIDKERPIKPLTLKEVATEIDVHESTVSRAVNGKYLETDFGVF
ELKKFFTTRIPTNSTEQTEDLSADTAKKKLQELVDQEDKNKPLSDQKLVELLKKDEIAIS
RRTVAKYRDLLGIPSSSKRKRYDN
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgagcaaaatttttcacaaaaacagcagcagacacagaaactagccatgacg
caacagttgcaacagtccatccaagttttacaatataacagtgaggagctgttggcattc
gttgagaatcaagcaatggaaaatccattggtggaagttgttgagccggaatggcagcca
gattacataaaagcttcttcatcttcttatgaaggagaagagacaaattacctaaatcag
attcctgatacaaaagggtctttatttgattcattgatcgaacaagtccatttgaattac
cgagatacttttttgaggaaaatcgttctttatcttgtagaatacatcgatttgaacgga
tttttgacgattagtttagaagaagccggaaaagagattggagctacgcctatccaaatg
ctcgatgcgttgactctgattcagcaattagaaccagctggagtaggtgcacgtagtttg
caagaatgtctcatgcttcaaacagaacgagatgattatgcgccggaattagcttatatc
gtgttggaagaatgttttgaggaactggtggagcgaaaatggaaagaaatcgcacaacgt
ttttctgttgatctacatgctgttcagcagatattcgactatttacaaacgttgagtcca
agccctggccggattttcgaccgtagcagcgaattgtacattattcctgatgtccgggta
ttagtggacgacgataaaaatgtacaagttatctcaaaccgaaaaaatcagccaaatata
cgctttcaagagagttacttcaaacaaatgtcacaacaagcagataaagaaactgaaaat
tatttaaaagaacggaaacaggaattcgaatggttgaagaaaacgatcctacaacgtggg
gatacaattttgcgggttgctcaagtcattgtttcccggcaaaaagctttctttatcgac
aaggaacgtccaatcaagcctcttacgttaaaggaagttgcaactgagatagatgtgcat
gaatccacggtcagtcgtgcagtcaacgggaaatatttggaaacagacttcggtgtattt
gaattaaaaaaatttttcactacacgaattcctacgaatagtacagaacagacagaagac
ctttcagcagatacagcgaagaaaaagctgcaggaattagtcgatcaagaagacaaaaac
aagccgttgtctgaccagaaattggttgaattgctgaaaaaagatgagatagcgatctca
agacgaacagtagcaaaatatcgtgatttattaggaatcccgagttcatcaaaaagaaaa
cgttatgataactaa
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