Enterococcus faecium Aus0004: EFAU004_02469
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Entry
EFAU004_02469 CDS
T01772
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
efc
Enterococcus faecium Aus0004
Pathway
efc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EFAU004_02469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efc03400
]
EFAU004_02469
Enzymes [BR:
efc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EFAU004_02469
DNA repair and recombination proteins [BR:
efc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EFAU004_02469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
UvrD-helicase
AAA_22
HHH_8
SLFN-g3_helicase
T2SSE
AAA
DUF6386
IMS_HHH
AAA_12
AAA_28
HHH
CbiA
NTPase_1
TBPIP
AAA_29
NPHP3_N
HTH_IclR
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AFC64552
LinkDB
All DBs
Position
complement(2485035..2487623)
Genome browser
AA seq
862 aa
AA seq
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MQPEEMPYFVGTVAAIFFQNPSNFYKVLLVHISETTADYREKEIVVTGSFGDIQENETYR
FYGELVDHPKYGRQLKLERYEQEKPTTANGIVAYLSSEKFPGIGKKTAEKIVELLGEDAI
EKIIADPSVLKQISGLTKPKREMLAETIRLNHGMDQVIMGLNRYGFGSQLAFSIYQAYKN
ESLDIIEENPYQLVEDIEGIGFKRADNLAEQIGIAADSPRRIRAAILHQIFQHAVQTGDT
YVPAETLLQQTIRILETSRPIEIQPDQVATVIIQLVEEGKIQQEETNLYENSLYFSEWGI
GNSIQRLLSRKKEIHYPEKEVQKNIRRIEKIFGIQYGPSQEQAIAEAIRSPLFILTGGPG
TGKTTVINGIVNLFAELNGLELDPSKYTQEIFPILLAAPTGRAAKRMNETTGLPASTIHR
LLGLNGREKTPSVSTKELEGGLLIVDEMSMVDTWLANTLFKAIPTNMQVILVGDKDQLPS
VGPGQVLHDLLEIEQIPKMELNQIYRQGDGSSIIPLAHEIKEGRLPKDFTKNQKDRSYFR
SDAYQIEPLISKIVEKAKNKGFRAQDIQVLAPMYRGPAGIDALNKMMQEIFNPGKPGKKE
VHWNDTVYRIGDKVLQLVNTPELNVFNGDMGEITGIILAKDSEDKVDELVIQFDANEVTY
KRNEWNKITLSYCCSIHKSQGSEFKMVILPMVHQYQRMLQRNLLYTAVTRSKELLILLGE
EQAYVTCVANESASRMTTLKSRIMDNDKMNITLRTKLAAYEDSLVGNDPFEDGNYTKEPR
VVKEKLPVEDDSGTNETKNQVMETVEPDLFSSFVGEEKKEEVEPAVSKDFVLTAEVIDNQ
LVDPMIGMENSSPYDFIPAKNA
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcagccagaagaaatgccttatttcgttggtacagttgccgcgattttttttcaaaat
cctagtaatttttacaaagtgcttttggtacacatcagtgaaaccacagctgattaccgt
gaaaaagagattgtagtcaccggaagtttcggcgatattcaagaaaatgagacttatcgt
ttttatggagaattagtggatcatcctaaatacggaaggcagcttaaactcgaaagatat
gagcaagaaaagccaacaactgcaaatgggatcgtagcgtatctttccagcgaaaaattc
ccaggaatcgggaagaaaacagcagaaaaaattgtagaattgctgggagaagatgctatc
gaaaaaatcattgctgatccttcggtattaaaacaaatctccggtttgacgaagccaaaa
agagaaatgcttgctgagacgattcggctaaaccacgggatggatcaagtgatcatggga
ctgaatcgttacgggttcggtagtcagttagctttcagtatctaccaggcctataagaac
gagtctttggatatcatcgaagaaaatccgtaccagctagtcgaagacatagaaggaatc
gggttcaaacgtgcagataatctagccgaacaaatcggtattgcagcagattcaccgaga
agaattcgagcagctatcttgcatcagatttttcagcatgcagttcaaacaggagataca
tacgtaccggcggagacattgcttcagcaaacgatccgtattttagaaacaagtcgccca
attgaaatccagcctgatcaggttgctactgtaattatccaacttgttgaagaaggaaag
atacaacaagaagagactaatctttacgaaaacagtttgtacttttctgaatgggggatc
ggtaattcgatccagcgccttctcagtcgtaaaaaagaaatccattatcctgaaaaagaa
gtgcagaagaatattcggcgtatcgaaaaaatattcggcatacagtatggaccttcgcaa
gaacaagctatcgctgaagcaatccgttcccctctatttattttaacaggaggaccaggt
acggggaaaactactgtgatcaacggaatcgtcaatctttttgcagagttgaacggactg
gaattggatccttcaaaatatacccaagaaatttttcctattctacttgcagcaccaact
ggccgagcagctaaacgaatgaacgaaacgacaggtctgcctgccagtacgatccatcgt
cttctggggctgaatggacgggaaaaaacaccttcagtcagtacgaaagaattagaaggc
ggacttttgattgttgatgagatgtctatggtcgatacatggctggctaacacattattc
aaagcgattccgacgaatatgcaagttatcttagtaggagacaaagatcagcttccctct
gtcggtcctggtcaagtactccatgatcttttggaaatcgaacaaattcccaaaatggaa
ctcaatcagatttatcggcaaggtgatggttctagtattattcctcttgcccatgagatc
aaagaaggacgtctgccaaaagatttcacaaagaatcaaaaagatcgttcctatttccga
agtgatgcttatcaaattgaacccttgatctctaaaattgtggaaaaagcgaaaaataag
ggattccgtgcacaagatatccaagtattagcaccaatgtatcggggacctgcagggatc
gatgcgttaaataaaatgatgcaggagatattcaatccagggaaacctggaaaaaaggaa
gtacattggaacgacaccgtttatcggataggagacaaagtcctccaattagtcaatact
cccgaattgaatgtattcaatggagatatgggagaaatcacgggtatcatcttggcaaaa
gattctgaagataaagtggatgaattagttatccagtttgatgcaaatgaggtcacttat
aaaagaaacgaatggaataaaatcactctttcttattgttgctcaatccataaatcacaa
ggcagtgaattcaagatggttattttgcccatggtccatcaatatcagcggatgcttcag
cgtaatttgctctacacggcagtgactcgcagtaaggaactgttgattttgttaggggaa
gagcaagcctatgtcacttgtgtagcgaatgaatcagcaagccggatgactacgttgaaa
tcaaggatcatggataatgataaaatgaatatcactctccggaccaaactagcagcttat
gaagattctttggtcggaaatgatccatttgaagatgggaactatacaaaagagccacgg
gttgtaaaagaaaagctacctgtagaagatgacagtgggacgaatgaaacgaaaaaccaa
gtaatggaaacagtggaaccagatctgttttcttcatttgttggagaagaaaagaaagaa
gaggtagaacctgctgtttctaaagatttcgttcttacagcagaagtgatcgataaccag
ttagtagatccgatgattggtatggaaaacagttctccctacgattttataccggcaaaa
aatgcttga
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