Enterococcus faecium Aus0004: EFAU004_02488
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Entry
EFAU004_02488 CDS
T01772
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
efc
Enterococcus faecium Aus0004
Brite
KEGG Orthology (KO) [BR:
efc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efc03400
]
EFAU004_02488 (sbcC)
DNA repair and recombination proteins [BR:
efc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EFAU004_02488 (sbcC)
Archaeal homologous recombinant proteins
EFAU004_02488 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
WSN
Motif
Other DBs
NCBI-ProteinID:
AFC64571
LinkDB
All DBs
Position
complement(2507026..2510154)
Genome browser
AA seq
1042 aa
AA seq
DB search
MKPKKLQLKNFGPFINETVDFSRLTEAPLFLISGKTGAGKTTIFDGITFALFGETSGRLR
SGKEMRSLFATPDEETSVTFSFEHQQMSYEIERKPEQVLAKRKGNGTKKQAAKVTLTIFD
GKGKEIKQITKRTEADQLIRELMNLDAKQFSQIVLLPQGEFRNFLVSSSSDKETVLRHLF
GTQFFQQFNERLKEKAKQQQQKLDHLEQELHLLQKRFVLVKEEEPAAGFEAVLAQWTNHQ
AILEKQITEEKEALTELQEKQKQLENSYYRFESLKKSYEEKTILINKQKELAAQKDEIEE
KKRWIGYYEFTQRLVEPIQRLQEIKVEKIELSQKSSEQTKKLAMTTQNYEEWQKNEANRV
RRQTKIKEAAQKLQNKQMMVPIVESLRSKKQDAEQLTISLDKEELNAEKLYQNLAIYQER
TRILQENLLDQEKLQEDRLAFGQLKYLDEKQQEIEKQKAKDTGSLAQIREELKKATEEIT
KNSQLLKEQTEQAEQLKSQWAKQQIARLQLFLRPGEPCLVCGSTEHPIQQLKHEQPNKED
ILKVEQQLAEAESAVERTQQIIAKSEAHENNLQQQLSDLEQKIMATNIQLAEQEEHLQQA
LKKAFPEITEQKTKTTLVVIEQSLDRRKSKMANARIELEEIRQQAEKLEQQLAVYKQQQT
EKNNQLQQLQGEIKSLEQQLQDTDSNCLEEEIRRLEKQLEEDSNQLAVEQKAGVQLLQDL
HTLRTQLDLQHEQIEKIDEKIEKEQERIAKKLESQSYFSTIEEICAFAQQQAQYKENQRT
VTSYHEEQLVTADRLRQLENIQLTETFPDTEEISQQLEEIRRMIEIKQEKIYGLQEQKIS
NQKIYDECLSIYHTSQTKLDELTQLQQLSQTFNGENPKKTSLERYVLQVYLQEVLQVAND
HLQRLTKNRYQFELADTIGSYRGKTGLEINIYDDQAGMSRSAHTLSGGESFIAALSLALA
LADVIQTQAGGVAIDALFIDEGFGSLDEEALEMAMEALETIESEGRMIGIISHVRELKER
VLQQIRIDTEGSGQSKIRYQLG
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgaaaaaattacaacttaaaaattttggtccttttatcaatgagaccgtagat
ttttcacgtttgacagaagcaccgctttttttgatcagcgggaagacaggagctggcaaa
acgacgatttttgatgggatcaccttcgcactttttggtgaaacttccggaagacttcgc
tctggaaaagagatgcgttctttgtttgctacaccagacgaagaaacaagcgtgactttt
tcttttgaacatcagcagatgagctatgaaatcgaacgaaaaccagaacaagttttagca
aaacgaaaaggaaacggaacaaaaaaacaggcagccaaagtaacgttgaccatttttgat
gggaaaggaaaagaaataaaacaaatcacaaaacgtacagaagcagatcagttgatcaga
gaactgatgaatctcgatgcgaaacagttttctcaaatcgttttactaccccaaggagaa
ttccgtaattttttggtttcatcaagcagtgataaagagactgttttacgtcatttattc
ggtactcaatttttccaacagttcaatgagcgattaaaagaaaaagcaaaacaacagcaa
caaaaattggatcatttagagcaagagctgcatcttctgcaaaaaaggtttgttttagtc
aaagaagaggaaccagcagcagggtttgaagccgttttagcccaatggacaaaccatcag
gcaatactcgaaaaacaaatcacggaagaaaaagaagctctaacggaacttcaggaaaaa
caaaagcaactagaaaattcctactatcgttttgaaagcttgaaaaaaagttatgaagaa
aaaacgatattaataaacaagcaaaaggaattagctgctcaaaaagacgaaatagaggaa
aagaaacgatggattgggtattatgaatttacgcaacgattagtcgaaccaatccagcgc
ctacaagaaataaaagttgaaaaaatagaactgtcacaaaaaagtagtgagcaaacaaag
aaactagcgatgactacgcagaattatgaagagtggcaaaaaaatgaagcaaaccgcgta
cgccgacaaacaaaaatcaaagaagctgctcaaaaactgcaaaacaaacagatgatggtg
ccaattgtcgaatccttacgtagtaaaaaacaagacgcagaacaattaacaatttcattg
gataaagaagaattgaatgccgagaagctgtatcaaaatctcgctatctatcaggaaaga
actcgaattcttcaagaaaatttactggatcaggaaaaactgcaagaagatcgtcttgct
tttggacagttaaaatatctagatgaaaagcagcaagaaatagaaaaacaaaaagcaaaa
gacactgggtcgctcgcacagataagagaagaactcaaaaaagcaactgaagaaataaca
aaaaatagtcagctattgaaagaacagacagaacaagcagaacagctgaaaagccaatgg
gcaaagcagcaaattgctcgtcttcagctttttttgcgtccaggggagccatgtcttgtt
tgtggatcaacggaacaccccatacaacaattaaaacacgaacagccaaataaggaagat
atcttaaaagtagaacaacaactggcagaagctgagtctgctgtagaaagaactcagcaa
atcattgccaaaagtgaagcacatgaaaataatcttcaacaacaattatcagatttagaa
caaaaaatcatggcaacgaatatacaattggctgaacaagaagaacacttgcaacaggct
ttgaaaaaggcatttcctgagataacagaacaaaaaacaaaaacaactcttgtagtaatc
gaacaatctttagatagacgaaaaagcaagatggccaatgcaagaatagagctggaagaa
ataagacaacaagcagaaaagctcgaacaacaattagctgtctacaaacagcagcagaca
gaaaaaaataatcagctccagcaactgcaaggagaaatcaaaagtttagaacaacaattg
caagatacggatagtaactgtttagaagaggagatacgacgacttgaaaaacagttagaa
gaagactcgaatcaactagctgttgagcagaaagcaggagtgcaattgttgcaagatctt
catacgcttcggacacagcttgatcttcaacatgaacaaatagaaaaaatagatgaaaaa
atagaaaaggaacaagaaagaatagctaaaaagttagaaagccagtcgtatttttcaaca
attgaagaaatctgtgcatttgcacaacagcaagcacaatataaagaaaaccaacgtaca
gttacttcttatcatgaagagcaattagtgacagctgaccggctgcgtcaattagaaaat
atccagctaactgagacattcccagatacagaagagatcagccaacagttagaagaaata
agacgtatgatcgaaataaagcaagaaaagatatacggtttacaagaacaaaaaattagt
aatcaaaaaatctacgatgaatgtctttcgatttatcacacaagccagacgaaattagat
gagcttacgcaattacagcagctttcgcaaacattcaacggagaaaatcctaagaagact
agtttggaacggtatgtgcttcaggtttatcttcaagaagtgttacaagtagcaaatgat
catctccaacgtttaacgaaaaatcgttatcaatttgagctagcggataccattggcagt
tatcgagggaaaaccggattagaaatcaatatctatgatgatcaggcaggtatgtctcga
agtgcgcataccctgtctggcggtgagagttttattgcagcactttctttagcattagct
cttgccgatgtgatccagacacaagctggtggtgtagcaatcgatgcattgtttattgat
gaaggatttgggtcattagatgaagaagctttggaaatggcaatggaagctttagaaacg
atcgaaagtgaaggaagaatgatcggcatcattagtcatgtaagagaattgaaagaacga
gtattacaacaaataagaattgatacagaaggtagcggacaaagcaaaatacgctatcaa
cttggataa
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