Enterococcus faecalis D32: EFD32_0577
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Entry
EFD32_0577 CDS
T02172
Name
(GenBank) excinuclease ABC, Beta subunit
KO
K03702
excinuclease ABC subunit B
Organism
efd
Enterococcus faecalis D32
Pathway
efd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
efd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EFD32_0577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efd03400
]
EFD32_0577
DNA repair and recombination proteins [BR:
efd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EFD32_0577
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EFD32_0577
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
AAA_16
AAA_22
AAA_7
AAA
AAA_5
AAA_25
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
AFO43467
LinkDB
All DBs
Position
594012..596009
Genome browser
AA seq
665 aa
AA seq
DB search
MIERETSNTFHLASKYEPAGDQPAAIAELVDGVKGGEKAQILLGATGTGKTFTISNVIQE
VNKPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSI
NDEIDKLRHSATSSLLERNDVIVVASVSCIFGLGDPREYSQQVVSLRVGMEMDRNELLKS
LVDIQFERNDIDFQRGRFRVRGDVVEIFPASRDEHALRVEFFGDEIDRIREVDALTGEIV
GETEHVAIFPATHFVTNEEHMEHAISQIQEELEARLKVLRSENKLLEAQRLEQRTNYDIE
MMREMGYTSGIENYSRHMDGRQEGEPPYTLLDFFPDDFLLVIDESHVTMPQIRGMYNGDR
ARKQMLVDYGFRLPSALDNRPLRLEEFEQHVNQIVYVSATPGPYEMEQTETVVQQIIRPT
GLLDPEVEIRPIMGQIDDLVGEIHERIEKDQRVFVTTLTKKMAEDLTDYFKELGLKVKYL
HSDVKTLERTEIIRDLRLGEFDILIGINLLREGIDVPEVSLIAILDADKEGFLRSERSLV
QTMGRAARNAEGKVIMYADKITDSMQRAMDETARRRAIQEAYNEEHGIEPKTIIKEIRDL
ISISKTADKDETVVQLDKSYEDLSRQEKADLLMKLEREMKDAAKALDFETAATLRDTILE
LKAAK
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaagagaaacttccaatacctttcatttggcttctaaatatgagcctgccgga
gatcagccagccgctattgctgaactagttgacggtgtcaaaggtggagaaaaagctcaa
attttacttggagcgaccggaacaggtaaaacatttacaatctctaatgtgattcaagaa
gtgaacaaaccaacattagtgattgcacataataaaacactagctggacaattatacggg
gaatttaaagaatttttcccagataatgcggtcgagtattttgtcagttactatgattat
tatcaaccagaagcatatgtaccctcaagtgatacatatattgaaaaagattccagtatt
aatgatgaaattgataaactacgccattcagcgacaagttctttattggaacgaaacgat
gtcatcgtggtagcatcagtttcttgtatttttggtttaggggatccgcgggaatacagt
caacaagttgtttcattacgtgtgggaatggaaatggatcgtaatgagttactaaaaagc
ttagtcgatattcaattcgaacgaaatgatattgattttcaacgggggcgttttcgtgtc
cgcggtgatgtggttgagatattcccagcttcacgggatgagcatgcgctacgtgttgaa
tttttcggagacgaaattgatcgaattcgtgaagtagatgcgttaactggtgaaattgtc
ggcgaaacagagcatgtcgctatttttccggcaacacacttcgtgacgaacgaagaacat
atggaacacgccatttcgcagatccaagaagaattagaggcacgtttgaaagtgcttcgc
agtgaaaacaaattattggaagcccaacgtttggaacagcgaactaactatgatattgag
atgatgagagagatgggctatacgtcagggattgagaattactctcgacatatggacggt
cgccaagagggagagccgccgtatacgctgttggactttttcccagatgacttcttactt
gtaatcgatgagtctcatgtaacaatgccgcaaattagagggatgtataatggcgaccga
gcacggaaacaaatgttagtggactatggtttccgtttaccaagtgcacttgataaccga
ccgcttcgtttagaagaatttgaacaacatgtaaaccaaattgtttatgtatcggcaaca
ccaggcccttatgaaatggaacaaacagagacggttgttcaacaaatcattcggccaaca
ggtttactagatccagaagtagaaatccgcccaattatgggtcaaattgatgacttggtg
ggcgaaattcatgaacggatcgaaaaagatcagcgggtgtttgtcacaaccttaacgaag
aaaatggccgaagatttaaccgactatttcaaagaattaggcttaaaagttaaatatttg
catagtgatgtaaaaacactggaaagaacggagattattcgcgatttacgattaggcgaa
tttgatattctaataggtattaacttattacgtgaaggaatcgatgtgccagaagtttcc
ttaattgcgattctagatgcggataaagaaggcttcttacgtagtgaacgctcattagtg
caaacgatgggacgggctgcccggaacgccgaaggaaaagtcattatgtatgcagataaa
atcaccgattcgatgcaacgagctatggatgaaacggcacgacgtcgggcaatccaagaa
gcatataatgaagaacatggcattgaaccaaaaacaattattaaagaaattcgtgatttg
atttctatttccaaaacagctgataaagatgaaacagtggttcaattggataaatcatat
gaagatttatcaagacaagaaaaagctgatttattaatgaaacttgaaagagaaatgaaa
gatgcggccaaagcgttagacttcgaaactgcagccacattacgagataccattcttgaa
ttgaaagctgccaaataa
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