Enterococcus faecalis D32: EFD32_0660
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Entry
EFD32_0660 CDS
T02172
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
efd
Enterococcus faecalis D32
Pathway
efd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EFD32_0660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efd03019
]
EFD32_0660
03009 Ribosome biogenesis [BR:
efd03009
]
EFD32_0660
Enzymes [BR:
efd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EFD32_0660
Messenger RNA biogenesis [BR:
efd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EFD32_0660
Ribosome biogenesis [BR:
efd03009
]
Prokaryotic type
rRNA helicases
EFD32_0660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AFO43550
LinkDB
All DBs
Position
683842..685389
Genome browser
AA seq
515 aa
AA seq
DB search
MKFKELGLAPELLSAVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPML
NKIDADNRVIQGLVIAPTRELAIQTQEELFRLGRDKKIRVQAVYGGADIGRQIRGLKDRP
HIVVGTPGRLLDHINRRTLKLETVETLVLDEADEMLNMGFLEDIEKIISQVPEQRQTLLF
SATMPPAIKNIGVKFMKQPEHVKIKAKEMTADLIDQYYVRSKDFEKFDIMTRLLDVQTPE
LTIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVLRSFKNGNLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMGYLHVIENLTKK
RMTPLRPPTEKEAFKGQLSAAVETIESDLEENGLDKYLESAEALLEKYSATDLAALLLKT
VAKDPADAVPVKITPERPLPSNKKGFNKNGRGGGGGNNRNRNRGGNGKGGSYRGNKNHKD
GDRNYKNSDRKNKDQRGGKRHNDKKRGFVIRENAK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttaaagaacttggtttagcgccagaattattatcagcggtagaacgcgcaggc
ttcgaggaagcaacccctattcaatcagaaacaattccgttagcgttagcaggaaaagac
gtaatcggacaagcacaaacaggaacagggaaaaccgctgcttttggcttaccaatgctt
aacaaaattgacgcagacaaccgcgttattcaaggattagtcattgcaccaacccgtgag
ttggctatccaaacacaagaagagttattccgtttaggccgcgataaaaagattcgcgtc
caagccgtttacggtggggctgatatcggtcgccaaatccgtggactaaaagatcgtcca
catatcgttgtaggtacaccaggacgtttactagaccatattaaccgtcgtaccttgaaa
ttagaaactgttgaaacattagttttagacgaagcagatgaaatgttaaacatgggcttc
ttggaagacattgaaaaaatcatctcacaagtgccagaacaacgtcaaacacttctattt
tcagcaactatgccgccagcaatcaagaatattggcgtgaaattcatgaaacaaccagaa
catgtgaagattaaagccaaagaaatgacggctgatttaattgatcaatattatgtacgt
tcaaaagactttgaaaaatttgacattatgacacgtttactagacgtgcaaaccccagaa
ttgaccattgtctttggtcggacaaaacgccgtgttgatgaacttgcccgcgggttagaa
gcgcgtggttacaaagcagaaggcatccatggcgacctatcacaacaaaaacggatgagc
gttttacgttcattcaaaaatggtaacttagatatcttagtggcaacagatgtagcagca
cgtgggttagatatttcaggtgtcactcatgtctataactacgatattccacaagatcca
gaaagttatgttcaccgtattggtcggacaggtcgtgctggtaaaggcggtatgtctgtg
acgtttgtaacaccaaacgaaatgggttacttacatgtcatcgaaaacttaacgaaaaaa
cggatgacaccattacgtccaccaaccgaaaaagaagcatttaaaggacaattaagtgca
gctgttgaaaccatcgaaagtgatctagaagaaaatggtttagacaaatatctagaatct
gctgaagcgttattagaaaaatattcagcgacagacttagctgcgttattattaaaaaca
gtagcgaaagatccagcagatgcggttcctgtaaaaattaccccagaacgaccattgcct
tcaaataaaaaaggctttaacaaaaatggccgtggtggtggcggtgggaacaaccgtaat
cgcaaccgtggtggcaatggtaaaggtggcagctatcgtggcaacaaaaaccataaagat
ggcgaccgtaattacaaaaatagcgaccgcaaaaataaagatcaacgtggcggcaaacgt
cataacgataaaaaacgtggtttcgtcattcgcgaaaacgccaaataa
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