Enterococcus faecalis D32: EFD32_0977
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Entry
EFD32_0977 CDS
T02172
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
efd
Enterococcus faecalis D32
Pathway
efd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EFD32_0977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efd03021
]
EFD32_0977
03019 Messenger RNA biogenesis [BR:
efd03019
]
EFD32_0977
Transcription machinery [BR:
efd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EFD32_0977
Messenger RNA biogenesis [BR:
efd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EFD32_0977
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AFO43867
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All DBs
Position
1021280..1022572
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AA seq
430 aa
AA seq
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MSDYLTMAELENSTLKDIYAYAKEFKIPYYSQMNKKELSLAVIRAQAEKQGFFFMEGILD
IVSQDGYGFLRPINYGPSAEDIYISSSQIRRFGLRNGDKVAGKARPPKESERYYGLMHVE
SVNGKDPEEAKERPHFPALTPLYPEKQLTLETTAGRLSTRMIDVFAPIGFGQRGLIVAPP
KAGKTSVLKEIANGITENHPDVELILLLIDERPEEVTDLERSVKGDVVSSTFDQQPQNHT
RVAELVLDRAMRLVEDKRDVVILMDSITRLARAYNLVVPPSGRTLSGGIDPAAFFKPKRF
FGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLSRELAERRIFPAIDI
KKSSTRKEELLMTPEQLEETWKLRNNMSGDSLEYTDQFIKMLKRTQNNQQLFEVFHDVSF
GKQIKRNPKR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactatttaacaatggctgaattggaaaacagtacgttaaaagatatttatgcg
tacgcgaaagagtttaaaattccttattatagccaaatgaacaaaaaagaattgtcttta
gctgtgattcgtgcacaagctgagaagcaagggtttttcttcatggaaggaattttagat
attgtttctcaggatggttatggttttttgcggccaattaattatggaccaagtgcagaa
gacatttatatttcttcttctcaaattcgtcgtttcggattgagaaatggggacaaagta
gctggcaaggcgcgtccgccaaaggaatcagaacgttactatggactcatgcatgttgaa
agtgtcaatgggaaagatcctgaagaagcgaaagagcggccacattttccagcgctaaca
ccgttgtatcctgaaaaacaattaacgttagaaacaacggctggcagattatcaacacga
atgattgatgtatttgccccaattggttttgggcaacgtggtttaattgtagcgccgcca
aaagccgggaaaacaagtgttttaaaggaaattgctaatgggattacagaaaatcatcct
gatgtggaattgattctgttgttaattgacgagcgtcctgaagaagtgactgatttagag
cgaagcgttaaaggcgatgtggtttcttcaacttttgatcaacaaccacaaaatcatacg
cgagttgctgaattggttttggatcgagcaatgcgcttagttgaagacaaacgggacgta
gttattttaatggacagcatcactcgtttagcaagggcctataatttagtggtcccgcct
agtggtcgaaccttaagtggcggaatagatccagctgcgtttttcaaacctaaacgattt
tttggtgctgccagaaatatcgaagaagggggcagtctgactattttagccacggcattg
gtggatacaggtagccgaatggatgatgtcatctatgaagaattcaaaggcacaggcaat
atggagctccatttatctcgtgaattagcagagcgccgtattttcccagcaattgatatt
aaaaaatcaagtacgcgaaaagaagagttgctaatgacaccagaacaactagaagaaacg
tggaaattgagaaataatatgtcaggagactcgctggaatatacggatcaattcataaaa
atgttgaaacggacccaaaataatcaacaattatttgaagttttccatgatgtttcgttt
ggcaaacaaattaaaagaaatccaaaaagataa
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