Enterococcus faecalis D32: EFD32_1190
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Entry
EFD32_1190 CDS
T02172
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
efd
Enterococcus faecalis D32
Brite
KEGG Orthology (KO) [BR:
efd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efd03019
]
EFD32_1190
03009 Ribosome biogenesis [BR:
efd03009
]
EFD32_1190
Enzymes [BR:
efd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EFD32_1190
Messenger RNA biogenesis [BR:
efd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EFD32_1190
Ribosome biogenesis [BR:
efd03009
]
Prokaryotic type
rRNA helicases
EFD32_1190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Microtub_bd
Helicase_RecD
CMS1
PRAI
Motif
Other DBs
NCBI-ProteinID:
AFO44078
LinkDB
All DBs
Position
1243370..1244719
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AA seq
449 aa
AA seq
DB search
MPSFKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPL
MDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTDKQRQLNKLK
HQQPHVVIGTPGRILDMMNEQALKVHTAFAFVVDEADMTLDMGFLAEVDQIAGRLPEKLQ
MLVFSATIPEKLRPFLKKYLENPVIEHIKPKAVISETIDNWLISTKGKNSNQIIYQLLTI
GHPYLAIVFANTKQRVDEITDYLKDQGLKVAKIHGDITPRERKRVMRQVQNLDYQYVVAT
DLAARGIDIEGVSHVINAEVPHELDFFIHRVGRTGRNGLNGTAITLYSPADDEAITQIEQ
LGVSFKPKEIKNGEIVETYDRNRRTKREKSREELDPTLIGLVKKKKKKIKPGYKKKINWA
IEDSNKKKRKIERRQKDRSARKAKKNSSN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgccttcatttaaacaatttcaatttcaaccttttatcaacgaagcactcgcagaaaaa
gggtttgaagaaccaacagaagtccaagaaaaattaatcccaatcattaagaaagggaaa
agtgtcattggacaatcgcaaacaggaagtggaaagacgcatacttttttacttccatta
atggataaagttaagccaactatcgacgaagtacaaattgtgattactgcgcctagtcgt
gaattagccaatcaaatttatcaagaagcgcagcaattggctcgtttcagtcaaccagaa
attcgagtgtcaaattttgttggcggaacagataaacaacgtcaattaaataaattaaag
catcagcaacctcatgtggtgattggtacaccagggcggattttagatatgatgaatgaa
caagccttgaaagtgcatacggcttttgcctttgttgtcgatgaagcagacatgacatta
gatatgggctttttagcagaagtcgatcaaattgctggtcgtttgccagaaaaattacaa
atgctcgttttttctgcaaccattccagaaaaattacgaccatttttaaaaaaatattta
gaaaatccagtgattgaacatatcaaaccaaaagcagttatttcagaaacaattgacaat
tggttgatttccaccaaaggaaaaaacagcaatcaaataatttatcaattattgactatc
gggcatccttatttagcgattgtttttgcaaatactaaacaaagagttgatgaaatcacc
gattacttaaaagatcagggcctaaaagttgccaaaattcatggagacattacaccacgc
gaaagaaaacgtgtgatgcgtcaagttcaaaatcttgactaccaatatgtagtagctact
gatttagccgcacgtgggattgatattgaaggggtttcacatgtcatcaatgcagaagtt
ccacatgaattggacttctttatccatcgggttggccgcacaggacgtaatggattgaat
gggactgccataacattatattcaccagcagatgatgaagcgattactcagattgagcag
ttaggtgtttctttcaaaccaaaagaaattaaaaatggtgagattgtagagacgtatgat
cgtaatcgtcgaacaaaacgagaaaaatctcgagaagaattagacccaacgttaattggt
ttagtgaaaaagaaaaagaaaaaaattaaaccaggatacaagaaaaaaattaattgggca
attgaagacagcaataagaaaaaacgtaaaattgaacgtcgtcaaaaagatcgttctgct
aggaaagcaaaaaagaattcttctaactaa
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