Enterococcus faecalis D32: EFD32_2309
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Entry
EFD32_2309 CDS
T02172
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
efd
Enterococcus faecalis D32
Brite
KEGG Orthology (KO) [BR:
efd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efd03400
]
EFD32_2309
DNA repair and recombination proteins [BR:
efd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EFD32_2309
Archaeal homologous recombinant proteins
EFD32_2309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_23
SMC_N
AAA_21
WSN
DUF3781
Shufflon_N
Motif
Other DBs
NCBI-ProteinID:
AFO45191
LinkDB
All DBs
Position
complement(2373785..2376922)
Genome browser
AA seq
1045 aa
AA seq
DB search
MKPLSLTLKNFGPYINETIDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKLR
LGKEMRSTFADPSEATEVTLLFKHNEYLYELNRLPEQELFKKRGTGVRKQSAKISLIVKD
AQGKELRAYSKRREVDELIQELLHLNANQFAQIVLLPQGEFRTFLIAKSDEKEKVLRNLF
GTELYQLFSENLKERLKIANQEIQETQQKIELKTEQLHWSEEPEPTMTLFEKLQLLESQQ
QEAQQQLLVEREQIATLKQAKQAKEQVRYAIEERQNLQQQKEELLEKKAKQAEQETVIER
LKEQIQQLKWSQKQQSLAEKVFEKRSEKQQKEQETKSKQQALMETQQALTDWQAIMSELE
EQQPLIAEKQEHLQTIQRQLPQYQEYEQLAQRKIAEQANYQAIQKEYESCQQEKTTLADK
VATAKQFIEQEGTLEKANFECSSVADHWQNFVERWQKNQKAWQKISQNQGELHELTQRFA
VEQQQKSVEEAKLQTKKSQWASLQIQRLSLLLEEGEPCPVCGSLEHPKQQTHQEVSLEEI
NQAERELTEVEKTVQRFTETLSALGAEKQQKESQLQEQEAAYTEEQEQLAAQFADLQLPL
TGLTFSQVTPAEIAEVESQLAKEKQQIAQKLTEISVEKDRLAELEEQVAENSQRFEVLRQ
QVETMQQSLERITIQQQMIASQLLDATVTYEEMTKQQALLQEELSAFERQKENVTTQGET
LKKEEMILESTLTHLEKEQQTLQQTVAQLESQLKAVLTEQGVTEDQLTEWLKEVPTLESQ
QEQIALFEQEQTQLTIQLAEIEKKLSSDTFPELSLITTEIEQITQQIEEQEKKYYQLHEK
MLNNQQLVQEINAQRTTIEDKFEEVAALQQLADTVNGNNPKKISFERYMLQTYLERVLTV
ANQRLDRLTNSRYQFELNHEAGSYRNQTGLEINIYDDNSGTVRSAHTLSGGESFIAALAL
ALSLAEVIQEQAGGVLIDALFIDEGFGSLDEEALEMAMEALETIENEGRMIGIISHIGEL
KARIPQQLQIKSNGNGQSTVHYQLA
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccattatctttaacattgaaaaacttcggaccgtatattaatgaaaccattgat
tttacgaagtttgaagattcttcactttttctaattagtggaaaaacagggtctgggaaa
acaacgatttttgatggaatgagctatgctttgtttggtgaaagttctggaaaattacgt
ttaggcaaagaaatgcgttccacatttgctgacccctcagaagccactgaagttactttg
ctttttaaacataacgagtatctctatgaactgaaccgccttcccgaacaagaacttttt
aaaaaacgtggcacaggagtccgtaaacaaagtgccaaaatttctttaattgtcaaagat
gctcaagggaaagaactacgagcctattctaaaagacgtgaagtggacgaactcattcaa
gaattattgcatttgaatgccaatcaatttgctcaaattgtattgttaccacaaggagag
tttcggacttttttaattgctaaaagtgatgaaaaagaaaaggttttgcgtaatttattc
ggaacagaattgtatcagttgttcagcgaaaatttaaaagaacgcttaaaaattgccaat
caagagattcaagaaacccagcaaaaaattgaactgaaaacagaacagttgcattggtca
gaagaacctgaaccgacaatgacactttttgaaaaacttcaattattagaaagccaacaa
caagaggctcagcaacaactattagttgaaagagaacaaattgcaaccttaaaacaagcc
aaacaagcaaaagagcaagttcgttatgctattgaagaacgacaaaacttgcaacagcaa
aaagaagaattactggaaaagaaagcaaaacaagctgaacaggaaaccgtcattgagcgg
ttaaaggaacagattcagcaattaaaatggagccaaaaacagcaatctttagctgaaaaa
gtctttgaaaaacgaagcgaaaaacaacaaaaagaacaagaaacaaagtccaaacaacaa
gctctcatggaaacgcaacaagcattgacagattggcaagcaatcatgagtgagttggaa
gaacaacaaccattgattgctgaaaaacaagaacatcttcaaacgattcaacgtcaatta
ccacaataccaagaatatgaacagttagctcaacgaaaaatagcagaacaagccaattat
caagccattcaaaaagagtatgaatcttgccaacaggaaaaaacaacattagcggataaa
gtggcgacagccaaacaatttattgaacaagaaggaacacttgaaaaagcaaattttgaa
tgttctagtgtagcagatcattggcaaaattttgtagaacgttggcaaaaaaatcaaaaa
gcttggcaaaaaattagtcaaaaccaaggggaattgcacgagttgacacaacggtttgct
gttgaacagcaacaaaaaagcgtcgaagaagcgaagttgcagacaaagaaaagtcaatgg
gcctctttacaaatccaacgattaagcttgttacttgaagagggggaaccttgcccagtt
tgtggctctttagaacatccaaaacaacaaactcatcaagaagtttccttagaagagatt
aatcaagcggaacgggaattaacggaagttgaaaaaacggtacaacgatttactgaaacg
ctctctgcattaggggcggaaaagcaacagaaagaaagccaattacaagaacaggaagct
gcgtatactgaggaacaagaacaattagcagcgcagtttgctgacttgcagttgccgtta
acaggactaactttttcacaagtaacacctgcagaaattgcggaagttgagtcgcaatta
gctaaagaaaaacaacaaatagcacaaaaactaacggaaatttcagtcgaaaaggaccgt
ctggcggaactagaagaacaagtagctgaaaattctcaacgctttgaagtgctccgacaa
caagtagaaacaatgcaacaaagtctggaaagaatcactatccagcagcaaatgattgct
agccaattattggatgcaaccgtcacatacgaagaaatgaccaaacaacaagctttgctt
caagaagaactctctgcatttgaacgtcaaaaagaaaacgtgacgacacaaggagaaacc
ttgaagaaagaagaaatgatccttgaaagtacgttgacgcatttggagaaagaacaacaa
acacttcaacaaacagtcgcacaacttgagagtcagttaaaggcagttttaacggaacaa
ggcgtgacagaggaccaattgacggagtggttgaaagaggtaccgacactagaaagtcag
caagaacaaattgctttatttgaacaagagcaaacccaactgactatccaactcgctgaa
attgaaaaaaaattatctagtgatacgttcccagaattatctttaatcaccacagaaatt
gaacaaataacacaacaaattgaagaacaagaaaaaaaatactatcaactgcatgaaaaa
atgctgaacaaccaacagttggttcaagaaattaatgcgcaaagaacaacaattgaagac
aagtttgaggaagttgctgcactacaacagttggcagatacggtgaatggcaataatcct
aaaaaaattagttttgaacggtatatgttacaaacgtatttagaaagagtgctgacagtc
gctaatcagcgtttagaccgcctgaccaatagtcgttatcaatttgaattgaatcacgaa
gcaggtagttatcggaatcaaacggggctagaaatcaatatttatgatgacaattcaggg
acggtgcgcagcgctcacacgttatcaggcggggaaagttttatagcagcgttagctttg
gcactttctttagcagaagtgattcaagaacaagcaggcggagtcttaattgatgcgttg
tttattgatgaaggctttggttccttagatgaagaagcattggaaatggcaatggaggcg
ttagaaacgattgaaaatgaaggccgcatgattgggattattagtcatattggcgaatta
aaagcacgaattccacaacaattacaaataaaaagcaatgggaatggtcaaagtaccgtt
cactatcagctagcttag
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