Enterococcus faecalis D32: EFD32_2394
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Entry
EFD32_2394 CDS
T02172
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
efd
Enterococcus faecalis D32
Pathway
efd03030
DNA replication
efd03430
Mismatch repair
efd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EFD32_2394
03430 Mismatch repair
EFD32_2394
03440 Homologous recombination
EFD32_2394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efd03032
]
EFD32_2394
03400 DNA repair and recombination proteins [BR:
efd03400
]
EFD32_2394
Enzymes [BR:
efd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EFD32_2394
DNA replication proteins [BR:
efd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EFD32_2394
DNA repair and recombination proteins [BR:
efd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EFD32_2394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_19
AAA_22
AAA_5
PIF1
TIP49
Rad17
TniB
AAA_7
AAA_assoc_2
AAA_14
Sigma54_activat
AAA_16
AAA_24
AAA_2
Viral_helicase1
Mg_chelatase
DUF815
RNA_helicase
AAA_18
DnaX_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AFO45276
LinkDB
All DBs
Position
complement(2456473..2458233)
Genome browser
AA seq
586 aa
AA seq
DB search
MAYQALYRVWRSQRFDDVVGQKAITQTLKNAIVQKKTSHAYLFTGPRGTGKTSAAKIFAK
AINCKHSQDGEPCNVCETCVAITEGRLNDVIEIDAASNNGVEEIRDIRDKAKYAPTQAEY
KVYIIDEVHMLSTGAFNALLKTLEEPPQNVIFILATTEPHKIPLTIISRTQRFDFKRIST
QDIVDHMAHIMQEMALDYEEQALYVIGRAAEGGMRDALSILDQTISFSDEKVTLEDAMQV
TGSLTYEMMDHYIQCCVAGDVERALEGLESILGEGKEARRFLEDLLLYCRDLLMYQQAPK
LLAEKAGTLTEAFKELATQTPAEKIYQLIQILSDTQNEIRFTNNANIYLEVATVKLAKTV
QPNKHNTPETANQDGSAEGNPELADLQNQIGQLKKELAELKKHGVAAKEADAPRQQARPQ
APKSSFRVPTERVYQVLNEATRTHLMNVKNVWEDLLQTLSVTQRAMLKASEPVAASPKGI
VVAFDYEIVCARATDDEEMQLAFNNNLSRLMDYTPEMVCITRESWPKLRQSFINQNQGSL
NHSEPENEMARLADEPPVTNEHSQENPVVDEAIAMFGEELVEVLDD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaagcactttatcgggtctggcgttcacaacgtttcgatgacgtagtagga
caaaaagcaattactcagacactgaaaaatgcgatagtgcaaaagaaaacatctcatgcc
tatttatttactggccctcgtggtacaggtaaaaccagtgccgcaaaaattttcgctaaa
gcgattaactgtaaacatagtcaagatggtgaaccttgtaatgtttgtgaaacctgtgta
gccattacggaaggtcgtttaaatgatgtcattgaaattgatgcggcgagtaataatggc
gtggaagaaatccgtgatattcgtgataaagcaaagtatgcaccgacacaagccgagtac
aaagtttatattattgatgaagttcatatgctatcaacaggcgcgttcaatgcactttta
aaaaccttggaagaaccgccacaaaatgttatttttatcttagcaacgactgaaccacac
aagattccgttaacgattatctcacggacgcaacgctttgattttaagcgaattagtacg
caagatatcgtcgatcatatggcccatatcatgcaggaaatggctctcgattatgaggaa
caagccctttatgtgattgggcgtgctgcggaaggtgggatgcgagatgccttgagtatc
ttggatcaaacgatttcctttagtgatgaaaaagtaacactggaagatgcaatgcaagtg
acaggcagcctaacctatgaaatgatggatcattatattcagtgctgtgtcgccggtgat
gttgaacgagcattagaaggcttggaaagtattttaggcgaaggcaaagaagcgcgccgt
ttcttagaagatttgttattatattgtcgagatttactgatgtatcagcaagcaccgaag
ttattagcagaaaaagcaggaactttgacagaagcatttaaggaactagctacacaaaca
cctgctgaaaaaatctaccaactaatccaaattttaagtgacacacaaaatgagatccgc
tttaccaacaatgcgaatatctatctggaagtagccactgtcaaattagctaaaacggtg
caacccaataaacacaacacgccagaaacagctaatcaagatggtagtgcagagggaaat
ccagaattagcagatttacaaaatcaaatcgggcaactgaagaaagaactggctgaatta
aagaaacacggtgtagctgccaaagaagcagatgcgccacgtcaacaagcacgaccacaa
gcgccaaaaagttcgttccgcgtacccacagaacgcgtatatcaagtcctaaacgaagcg
actagaacacatttaatgaatgtgaaaaatgtctgggaagacttactgcaaacattatct
gtgactcaacgagcgatgctcaaagctagtgaacctgtcgcagcgagtcctaagggcatc
gtggtggcatttgactatgagattgtttgtgctcgtgcaacagacgatgaagagatgcag
ttagctttcaataataatttaagccgtttgatggactatacaccagagatggtctgcatt
actagagaaagctggccaaaactaagacaaagttttattaaccaaaatcagggcagtttg
aatcattctgaacctgaaaatgaaatggctcgtctagcggacgaaccgcctgtaacaaat
gaacattcacaagaaaatccagtagtagatgaagcaatcgctatgtttggtgaagagctt
gtcgaagtactagatgattaa
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