Escherichia fergusonii: EFER_0166
Help
Entry
EFER_0166 CDS
T00811
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
efe
Escherichia fergusonii
Pathway
efe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EFER_0166 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efe03019
]
EFER_0166 (pcnB)
Enzymes [BR:
efe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
EFER_0166 (pcnB)
Messenger RNA biogenesis [BR:
efe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EFER_0166 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CAQ87747
UniProt:
B7LW50
LinkDB
All DBs
Position
complement(179715..181133)
Genome browser
AA seq
472 aa
AA seq
DB search
MTLPRCTIFTRVANFCRKVLSREESEAEQAAARPQVTVIPREQHAISRKDISENALKVMY
RLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMF
GPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVA
DFTVRDYVGGMQDLKEGIIRLIGNPETRYREDPVRMLRAVRFAAKLNMQISPETAEPIPR
LAALLNDVPPARLFEESLKLLQAGYGYETYKLLREYHLFQPLFPTITRYFTENGDSAMER
MIIQVLKNTDNRIHNGLRVNPAFLFAAMFWYPLMETAQRIAQESGLTWSDAFALAMNDVL
DEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERN
SELQRLAKWWGEFQVSAPPEQKGMLNELDEDPAPRRRHRRPRRRAPRREGTA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgacactaccgaggtgtactatttttacccgagtcgctaatttttgccgcaaggtgcta
agccgcgaggaaagcgaggctgaacaggctgccgcccgtccacaggtgacggtgatcccg
cgtgagcaacatgctatctctcgcaaagatatcagtgaaaacgctctgaaggtaatgtac
aggctcaataaagcgggatacgaagcctggttggttggcggtggtgtacgcgacctgtta
cttggcaaaaaaccaaaagattttgatgtcaccaccaacgccacgccggagcaggttcgc
aaactgttccgtaactgccgcctggtaggtcgccgtttccgtcttgctcatgtcatgttt
ggtccagagattatcgaagtcgcaaccttccgtggacaccacgaaggtaatgtcagcgac
cgcacgacatcccaacgcgggcaaaacggcatgttgctgcgcgacaacattttcggttcc
atcgaagaagacgcccagcgccgcgatttcaccatcaatagcctgtattacagcgtggcg
gatttcaccgtacgcgattacgttggtgggatgcaagacctgaaagaaggcattattcgg
ctgattggtaacccggaaacgcgctaccgtgaagatccggtacgtatgctacgtgccgtg
cgttttgccgcgaaactaaacatgcaaatcagcccggaaaccgccgagccaatcccgcgc
ctggccgcattgctcaacgatgtaccgccagctcgcctgtttgaagaatctcttaaactg
ttgcaggcaggttacggttacgaaacctacaagctgctgcgcgaataccatctgttccag
ccgttgttcccgaccattactcgttacttcaccgaaaacggtgatagcgcaatggaacgg
atgattattcaggtgttgaagaacaccgataaccgtattcacaacggtctgcgcgtgaat
cctgcgttcctttttgcagcgatgttctggtatccgttaatggagacagcacaacgcatt
gcccaggagagcggtctgacctggtcagatgcctttgcactggcaatgaatgatgtactg
gacgaagcctgccgttcgctggcgatccctaaacgtctcactacgttaacccgcgatatc
tggcaattgcagttacgcatgtcgcgccgccagggtaaacgtgcatggaagctgctggag
catccaaaattccgtgcggcttatgatcttctggcacttcgtgccgaagttgagcgcaat
tctgaattgcaacgcctggcaaaatggtggggtgaatttcaggtttctgcgccaccagaa
caaaaaggcatgcttaatgagcttgacgaagatccggcaccgcgccgccgtcatcgtcgt
ccacgccgacgtgccccgcgtcgtgagggtacggcgtga
DBGET
integrated database retrieval system
