Escherichia fergusonii: EFER_0255
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Entry
EFER_0255 CDS
T00811
Symbol
ygdL
Name
(GenBank) conserved hypothetical protein
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
efe03016
]
EFER_0255 (ygdL)
Transfer RNA biogenesis [BR:
efe03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
EFER_0255 (ygdL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
UDPG_MGDP_dh_N
DAO
Sacchrp_dh_NADP
NAD_binding_7
3HCDH_N
ELFV_dehydrog
TrkA_N
ApbA
NT5C
Motif
Other DBs
NCBI-ProteinID:
CAQ87824
UniProt:
B7LVV8
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Position
270819..271625
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AA seq
268 aa
AA seq
DB search
MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLI
DMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMSA
GYSYVIDAIDSVRPKAALIAHCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAK
LRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGTVCAMKATAEGPKRMDCASGFGA
ATMVTATFGFVAVSHALKKMMVKAARQG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtaattagtgatgcctggcgtcagcgttttggtggcacagcgcgtctgtat
ggtgaaaaagcgttgcaactgtttgctgatgcacatatttgtgtggtcggtattggcggt
gtcggctcctgggcggcggaagcgctggcgcgtacggggattggcgcaatcacgcttatc
gatatggatgatgtgtgcgtcaccaataccaatcggcaaattcacgcgctgcgagataac
gtcgggctggccaaagcggaagtaatggcggagcgtattcgccagattaacccggagtgc
cgtgtaacggtggtggatgacttcgtgacgccggataacgtagcgcaatatatgagtgcc
ggttattcgtacgtgattgatgccattgatagtgtgcgacccaaagcggcgctgattgct
cattgtcggcgcaacaaaatccctctggtcacgactggtggtgctggtgggcagattgat
ccgacgcagattcaggttaccgatctggctaaaacgattcaggacccgctggcggcgaag
ttgcgcgagcgcctgaaaagcgattttggcgtagtgaaaaacagcaaaggtaagctcggc
gtggattgcgtgttctctaccgaagcgctggtgtacccgcagtcagacggtacggtgtgc
gcgatgaaagccacggcagaagggccgaagcggatggattgtgcatctggatttggggcg
gcgacgatggtgaccgccacctttggttttgttgcggtttctcatgcgctgaagaagatg
atggtgaaagcggcgcgtcaggggtaa
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