Escherichia fergusonii: EFER_0279
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Entry
EFER_0279 CDS
T00811
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
efe03009
]
EFER_0279 (rumA)
Enzymes [BR:
efe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
EFER_0279 (rumA)
Ribosome biogenesis [BR:
efe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EFER_0279 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
RrnaAD
Methyltransf_11
Cons_hypoth95
MTS
TRM5-TYW2_MTfase
FtsJ
Methyltransf_4
Ubie_methyltran
Methyltrans_SAM
Methyltr_RsmB-F
PrmA
Methyltransf_15
Methyltransf_12
Methyltransf_23
DOT1
TPMT
CMAS
Motif
Other DBs
NCBI-ProteinID:
CAQ87847
UniProt:
B7LWN5
LinkDB
All DBs
Position
296588..297886
Genome browser
AA seq
432 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVTANDLDAFGQGVARHNGKALFIPGLLPQESAEVSVTEDKRQ
FARAKVVRRLNDSPQREVPRCPHFGVCGGCQQQHASVELQQQSKSAALARLMKHDVADII
ADAPWGYRRRARLSLNYLAKTQQLQMGFRKAASSDIVDVKQCPILVPQIEALLPKVRACL
MSLQTVRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHCERLSLFLAPDSEILE
PLVGETPWYDSNGLRLMFSPRDFIQVNDGVNQKMVAQAIEWLDIQPQDRVLDLFCGMGNF
TLALATRAASVVGVEGVPALVEKGRENARENGLANVTFYHENLEDDVTKQPWAKNGFDKV
LLDPARAGAAGVMQQIIKLEPIRVVYVSCNPATLARDSEALINAGYTIARLAMLDMFPHT
GHLESMVLFERV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacgacgcgtgacgacgcgtcagatcataaccgttaca
gccaacgacctcgacgcttttggtcagggtgtcgctcgtcataacggaaaagcgctgttt
attcccggcttattgccgcaagaaagcgcggaagtctctgtcaccgaagataaaaggcaa
tttgcccgggctaaagttgttcgtcgtttgaacgatagtccccagcgtgaagttcctcgc
tgcccacattttggcgtttgcggtggctgccagcaacagcatgccagcgtcgaactccag
cagcaaagcaaaagtgcggcgttggcgagattaatgaaacacgatgttgcagatattatc
gctgatgcgccgtggggatatcgccgccgtgcgcggttaagcctgaattatctggccaaa
acgcaacaattacagatggggtttcgcaaggctgcctccagtgacattgtcgatgtgaag
caatgccctattctggtgccccaaattgaagcattactgccaaaggtcagagcatgtctg
atgagtttgcagacagtgcgccatctcggacacgtcgagctggtgcaagcgaccagcggg
acgttaatgattttgcgccacactgcgccgctaagttctgccgacagagaaaaactggaa
cgcttttcgcattgtgaaagactttctctgttcctggcgcccgatagtgagatactcgaa
cccctggtcggtgagacgccctggtatgattccaacggtctacggttgatgtttagccca
cgcgatttcatccaggtgaatgacggcgtaaaccagaaaatggttgcacaagccattgaa
tggctggatatccagccacaggatcgcgtgctggatctgttctgtggaatggggaacttt
accctggcgttggcaacacgcgcagccagtgtggtaggtgtagaaggtgttcctgctttg
gtcgaaaaagggcgagaaaatgcacgtgaaaatggcttagctaatgtcacgttttatcac
gaaaatcttgaagacgatgttacgaagcagccctgggcgaaaaacggctttgataaagtc
cttcttgacccggcgcgggcaggtgcagcaggggtaatgcagcaaattataaagctggaa
ccaattcgtgttgtttatgtatcctgtaaccctgcgacgctggctcgggatagcgaagcg
ttaataaatgcaggatataccattgcgcgactggcgatgctggatatgttcccacacacg
gggcatctggagtcgatggttctttttgagcgcgtgtaa
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