Escherichia fergusonii: EFER_0346
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Entry
EFER_0346 CDS
T00811
Symbol
fhlA
Name
(GenBank) DNA-binding transcriptional activator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efe03000
]
EFER_0346 (fhlA)
Transcription factors [BR:
efe03000
]
Prokaryotic type
Helix-turn-helix
Other families
EFER_0346 (fhlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
GAF_3
AAA_5
AAA
HTH_8
AAA_19
Mg_chelatase
AAA_2
AAA_16
AAA_7
HTH_50
nSTAND3
AAA_3
MinC_N
DUF1374
Motif
Other DBs
NCBI-ProteinID:
CAQ87909
UniProt:
B7LWJ0
LinkDB
All DBs
Position
complement(357548..359638)
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AA seq
696 aa
AA seq
DB search
MSYTPMSDLGQQGLFDITRTLLQQPDLASLSEALSQLVKQSALADNAAIVLWQAQTQRAS
YYTTHSSSGPIAYEDETVLAHGPIRRILSRPDTLHCNYAEFSETWPQLAAGTLYPQFGHY
CLLPLAAEGRIFGGCEFTRVDDRPWSEKEFSRLQTFTQIVSVVAEQIQSRVSNNIDYDLL
CRERDNFRILVAITNAVLSRLDMDELVSEVAKEIHHYFNIDDISIVLRSHRKHKLNIYST
HYLDKHHPAHEQSEVDEAGTLTERVFKSKEMLLINLHERDSLAPYERMLFETWGNQIQTL
CLLPLKSGNTMLGVLKLAQCEEKVFTTANLNLLRQIAERVAIAVDNALAYQEIHRLKERL
VDENLALTEQLNNVESDFGEIIGRSDAMYRVMKQVEMVAQSDSTVLILGETGTGKELIAR
AIHNLSGRNSRRMVKMNCAAMPAGLLESDLFGHERGAFTGASTQRIGRFELADKSSLFLD
EVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLQKMVADREFRSDLYY
RLNVFPIHLPPLRERPEDIPLLVKAFTHKIARRMGRNIDSIPAETLRALCDMEWPGNVRE
LENVIERAVLLTRGNVLQLSLPDIAPATQVQPPVEKEVAQEGEDEYQLIVRVLKETNGVV
AGPKGAAQRLGMKRTTLLSRMKRLGINKDALIQGMP
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatacaccaatgagcgatctcggacaacaagggctgttcgatatcactcgtacg
ttattacagcagcccgatttggcctcactgagcgaggctctttcgcaactggtaaagcag
tctgcgctggccgacaacgccgccatcgtgttgtggcaagcgcagacgcaacgtgcgtcg
tactatacgacgcatagcagtagcggtccgattgcttacgaagatgaaaccgtactggct
cacgggccgattaggcggattttatcgcgcccggataccctgcactgtaactatgcagaa
tttagtgaaacctggccgcaactggccgccggtacactttacccacaatttggacactac
tgcttattaccactcgccgctgaagggcggatttttggtggctgtgaatttacccgtgtt
gatgatcgtccgtggagcgaaaaagagttttcacgcctgcaaacctttacccaaattgtc
tcagtggttgccgagcaaattcaaagccgggtgagtaacaatatcgactatgacctgctt
tgtcgtgagcgggataatttccgcatcctggtggcgataaccaatgcggtgttatcacga
ctggatatggacgaactggtgagtgaagttgccaaagagatccaccattatttcaatatc
gatgacatcagcattgttctgcgtagtcatcgcaaacataagctcaatatctattccacg
cactatctcgataaacatcatcctgcccacgaacagagtgaagtggatgaagccggaacc
ctgaccgaacgggtctttaaaagcaaagagatgctgctgattaacctccacgagcgtgat
tcgctggcaccttatgaacggatgctgtttgaaacctgggggaatcaaattcaaacgtta
tgcctgctgccattgaagtcgggtaataccatgctcggcgtattgaaactggcacagtgc
gaagagaaagtcttcaccaccgctaacctgaatctactgcgccagattgccgaacgtgtg
gctatcgccgtcgataatgcccttgcctaccaggaaattcatcgtttgaaagagcgtctt
gtcgatgagaacctcgccctgaccgaacaactgaataacgtcgagagtgattttggtgaa
atcatcgggcgcagcgatgccatgtatcgggtgatgaaacaggtcgagatggtggcgcaa
agtgacagtaccgtattaattcttggtgaaactggtactggtaaggaactgattgccaga
gcgattcacaatctgagcggacgtaatagtcggcggatggtaaagatgaactgcgccgca
atgccagccggactgctggaaagcgacctgtttggccacgaacgtggagcttttaccggt
gccagcacacagcgtattggccgtttcgaactggcggataaaagctcgctgttccttgat
gaagtgggcgatatgccactggaattgcaaccgaagttgcttcgcgtgctgcaggaacaa
gagtttgaacggcttggcagtaataagatcattcagacagatgtgcgattgatcgccgca
accaaccgcgatctacaaaaaatggtcgcggatcgtgaattccgtagcgatctttactac
cgtctgaacgtgttcccgatccatttaccgccattgcgtgagcgaccagaagatatcccg
ttgttggttaaagcgttcactcataaaattgcccgccgtatggggcgtaatatcgacagt
attcctgccgaaacccttcgcgccttgtgtgatatggaatggcctggcaatgtgcgggaa
ctggagaacgtgattgaacgtgcggtgttactgacacgcggtaacgtgctgcaactttcg
ttacccgatattgccccagcgacgcaagtacagcctcctgttgagaaagaagtcgcccag
gaaggggaagacgaatatcagcttattgtccgggtgttgaaagagacaaacggtgtggta
gcggggccgaaaggcgcggcccagcgtctggggatgaagcgaacaacactgctttcacgt
atgaaacgattaggaatcaataaggatgcgctaatccagggtatgccataa
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integrated database retrieval system
