Escherichia fergusonii: EFER_0411
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Entry
EFER_0411 CDS
T00811
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I, NADP-dependent
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
efe
Escherichia fergusonii
Pathway
efe00250
Alanine, aspartate and glutamate metabolism
efe00310
Lysine degradation
efe00350
Tyrosine metabolism
efe00650
Butanoate metabolism
efe00760
Nicotinate and nicotinamide metabolism
efe01100
Metabolic pathways
efe01120
Microbial metabolism in diverse environments
Module
efe_M00027
GABA (gamma-Aminobutyrate) shunt
efe_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
EFER_0411 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
EFER_0411 (gabD)
00310 Lysine degradation
EFER_0411 (gabD)
00350 Tyrosine metabolism
EFER_0411 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
EFER_0411 (gabD)
Enzymes [BR:
efe01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
EFER_0411 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
EFER_0411 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
EFER_0411 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
CAQ87972
UniProt:
B7LT09
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All DBs
Position
complement(421595..423043)
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AA seq
482 aa
AA seq
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MKLNDSNLFRQQALINGEWLDANNGEVIEVTNPANGDKLGSVPKMGADETRAAIDAANRA
LPAWRALTAKERANILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAIRAGIPAGVFSVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA
HERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDETDVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaacgacagtaacttattccgccagcaggcgttaattaacggggaatggctg
gacgccaacaatggcgaagtcatcgaggtcaccaatccggcgaatggcgacaagctgggt
agcgtacccaaaatgggcgcagatgaaacccgcgccgctattgacgccgccaaccgcgcc
ctacccgcctggcgtgcccttaccgccaaagaacgcgccaacattctgcgtaactggttc
aatttgatgatggagcatcaggacgatttagcgcgcctgatgaccctcgaacagggcaaa
ccgctggcggaagcgaaaggcgaaatcagctacgccgcctcatttattgagtggtttgcc
gaagaaggcaaacgcatttatggcgacaccattcccggtcatcaggccgataagcgcctg
attgtcatcaagcagccgattggtgttaccgccgctatcacgccgtggaacttcccggcg
gcgatgattacccgtaaagccggtccggcgctggcggcaggctgcacgatggtgctgaag
cccgccagtcagacgccgttctctgcgctggcgctggcagagctggcgattcgcgcgggc
attccggctggcgtatttagcgtggtgaccggttcggcgggcgcggtcggtaacgaactg
accagcaacccgctggtgcgcaagctgtcgtttaccggctcgaccgaaattggtcgtcag
ttaatggaacagtgcgcgaaagacatcaaaaaagtgtcgctggagctgggcggcaacgca
ccgtttattgtctttgacgatgccgatctcgataaagccgtggaaggagcgctggcctcg
aaattccgtaacgccgggcaaacctgcgtctgcgccaaccgcctgtatgtgcaggacggc
gtgtatgaccgctttgccgaaaaattgcagcaggcggtgagcaaactgcacatcggtgac
gggctggaaaaaggcgtcaccattgggccactgatcgatgaaaaagcggtagcaaaagtg
gaagagcatatcgccgatgcgctggagaaaggcgcgcgcgtggtttgcggaggcaaagcg
catgaacgcggcggcaacttcttccagccgaccattctggtggatgttccggccaacgcc
aaagtgtcgaaagaagagacgttcggccccctcgccccgctgttccgctttaaagatgaa
accgatgtgattgcgcaggccaatgacaccgagtttggccttgccgcctatttttacgcc
cgtgatttaagccgcgtcttccgcgtgggcgaggcgctggaatacggcatcgtcggtatc
aataccggcattatttccaatgaagtggccccgttcggcggcataaaagcctcggggctg
ggtcgtgaaggttcgaagtatggcatcgaagattatttagaaatcaaatacatgtgcatc
ggtctttaa
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