Escherichia fergusonii: EFER_0900
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Entry
EFER_0900 CDS
T00811
Symbol
elaC
Name
(GenBank) binuclear zinc phosphodiesterase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
efe03016
]
EFER_0900 (elaC)
Enzymes [BR:
efe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
EFER_0900 (elaC)
Transfer RNA biogenesis [BR:
efe03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
EFER_0900 (elaC)
Prokaryotic type
EFER_0900 (elaC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
CAQ88435
UniProt:
B7LM62
LinkDB
All DBs
Position
complement(916717..917679)
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AA seq
320 aa
AA seq
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MFYTSRNTFEKCDGLMELIFLGTSAGVPTRTRNVTAILLNLQHPTQAGLWLFDCGEGTQH
QLLSTSYNPGKLDRIFISHLHGDHLFGLPGLLCSRSMAGSMQPLTIYGPKGIQEFVETTL
RLSSSWTDYPLDVIEISAGEILDDGLRKVTAYPMEHPLECYGFRIEEHEKPGALDAKGLK
AAGVQPGPLFQDLKAGKTVTLEDGRQINGADYLAPATPGKVLAIFGDTAPCDNALELARH
ADVMIHEATLDMSMEAKANSRGHSSTCQAATLAREAGVSKLIITHISSRYDDKGCQRMLQ
ECRDIFPATDLAHDYAVFSV
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
ttgttttatactagccgcaatacttttgaaaaatgtgatggtctcatggaattaattttt
ttaggtacgtctgcgggtgtaccgacccggactcgaaatgtcacagcgatattactcaac
ctgcaacatccaacccaggccggcctgtggttatttgactgtggtgaaggtacgcaacat
caattgctaagcacaagttataatcccggcaaactggatcggatttttatcagccactta
catggcgatcatctttttggcttgccgggtttgctttgcagccgctctatggcagggagt
atgcaaccgctcactatttacggaccaaaaggtattcaggaatttgtagaaaccacccta
cggttgagcagttcctggacggattatccgctggacgtcattgaaatcagtgcaggagag
atcctggatgatggcctgcgcaaggtgaccgcgtacccgatggaacacccactggagtgt
tatggttttcgcattgaagagcatgaaaaacctggcgcattggatgctaaagggttaaaa
gcggcaggcgtgcagcccggtcccctgtttcaggatttaaaagcgggcaaaacagtaacc
ctggaagacggcaggcaaattaacggtgctgattatttagcgccagcaacgccaggaaaa
gtgctcgctatttttggtgacacagcaccctgtgataacgcgcttgaacttgcccgacac
gcagacgtgatgatccatgaagcaaccctggatatgtcgatggaagctaaagctaacagc
cgggggcacagttcgacgtgtcaggcagcaacattggcgcgagaagccggtgtaagtaaa
ttgattattacccatatcagctcacgttatgacgataaaggctgtcagcgtatgttacag
gagtgccgcgatattttcccggcaaccgatctggctcacgattacgcagtttttagcgtt
taa
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