Escherichia fergusonii: EFER_0987
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Entry
EFER_0987 CDS
T00811
Symbol
ybjK
Name
(GenBank) putative DNA-binding transcriptional regulator
KO
K23778
TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efe03000
]
EFER_0987 (ybjK)
Transcription factors [BR:
efe03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
EFER_0987 (ybjK)
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_31
TetR_N
TetR_C_6
TetR_C_28
TetR_C_11
Motif
Other DBs
NCBI-ProteinID:
CAQ88521
UniProt:
B7LN10
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Position
1019565..1020104
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AA seq
179 aa
AA seq
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MRRSNDPQRREKIIAATLEAIATHGIHAVTHRKIAIIAQVPLGSLTYYFSGIDELLTIAF
RRFTEIMTEQYQSFFTGVSEPIEACEAITEMIHSAQITTPEKMALMYQLYAFASRKPALK
KVMQNWMHSSQQTLQQWFDPDTARALDAFIEGMTLHFVTDSKPLTRDDILKMVKRIAGE
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtgcgacggagcaacgatccccaaaggcgagaaaagattattgctgccactctggaagcc
attgcgacgcacggtatccatgccgtgacacaccgtaaaattgcgataattgcgcaagtc
ccgttgggatcgttgacttattatttctcgggaatcgatgaattattgaccattgcattt
cgtcgttttacggaaatcatgacagagcaataccagtctttttttaccggagtctcggaa
ccgatagaagcctgtgaagccatcactgagatgatccatagtgcgcaaatcaccacgcca
gagaaaatggcgttgatgtatcagttatatgcttttgccagtcgtaaacctgctttgaaa
aaggtcatgcaaaactggatgcacagcagccagcagacgttgcaacagtggtttgatccc
gatacggcccgggcactggatgcatttattgaaggtatgacattgcattttgtgactgac
agtaagccactgacacgcgacgatattttaaaaatggtaaaaagaatcgctggggagtaa
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