Escherichia fergusonii: EFER_1050
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Entry
EFER_1050 CDS
T00811
Symbol
ycaO
Name
(GenBank) conserved hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
efe03009
]
EFER_1050 (ycaO)
Ribosome biogenesis [BR:
efe03009
]
Prokaryotic type
ribosomal protein modification factors
EFER_1050 (ycaO)
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Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
CAQ88579
UniProt:
B7LN68
LinkDB
All DBs
Position
complement(1083315..1085075)
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AA seq
586 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEG
LLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVS
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLM
AIFNNEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGS
EWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGPDNGWYTLRIGELKAMLALAGGDLEQ
ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFIRMYGAEAVEAA
SAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKATFWTK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacatttatccccggcaaagatgccgctctggaagattccatcgctcgcttc
cagcaaaaactttcagacctcggttttcagattgaagaggcctcctggctgaatcccgtg
cctaacgtctggtctgtacatattcgtgacaaagagtgcgcactgtgttttaccaacggt
aaaggcgcaaccaaaaaagcggcgctggcatccgccctcggtgaatatttcgagcgtctc
tcaaccaactacttttttgctgacttctggctgggcgaaaccatcgccaacggtccgttc
gtgcattatcccaacgaaaaatggttcccactgaccgaaaacgacgatgtgccggaagga
ctgctcgatgaccgtctgcgcgcgttttacgaccctgaaaatgaactgaccggcagcatg
ctgattgacctgcaatccggtaacgaagatcgtggtatttgcggtctgccatttacgcgc
cagtccgacaatcagaccgtttatattccgatgaatatcattggtaacttgtacgtttct
aacggtatgtccgctggcaatacccgcaacgaagcacgcgttcaagggttgtccgaagtt
ttcgaacgctacgtgaaaaaccgcattattgctgaaagcatcagcttgccggaaatcccg
gcagacgtgctggcacgttaccctgcagtagttgaagcaatcgaaacactggaagcggaa
ggtttcccaatctttgcttatgatggttcgcttggcggccagtatccagtgatttgcgtg
gtactgttcaatccggctaacggcacttgctttgcctctttcggtgcgcatcctgatttt
ggcgtagcactggaacgtaccgtgaccgagctgctgcaaggtcgtggcctgaaagatttg
gatgtgtttactccgccaaccttcgatgatgaagaagttgctgaacataccaaccttgaa
acgcactttatcgattccagcggtttaatctcctgggacctgttcaagcaggatgccgat
tatccgtttgtggactggaatttctccggcaccacggaagaagagtttgccacgctgatg
gctatcttcaacaacgaagataaagaagtttatattgccgattacgagcatctgggcgtt
tatgcttgtcgtattatcgtgcctggcatgtccgatatttatccggctgaagatttgtgg
ttagcgaataacagcatgggcagccatttacgtgaaacgattctttcactcccaggcagc
gagtgggaaaaagaagattacctgaacctcatcgagcaactggatgaagaaggttttgat
gactttacccgcgtgcgtgagctattgggtctggcaaccgggccggataacggctggtac
actctgcgtatcggtgaattaaaggctatgctggcgctggctggtggcgatctggaacag
gctctggtctggaccgaatggacgatggagtttaactcatcggtcttcagcccggaacgc
gcaaactattatcgctgcctgcaaaccctcctgctgctggctcaggaagaagatcgccag
ccactgcaatatctgaatgcttttatccgcatgtacggcgcggaggcggtagaagccgcc
agtgcggcaatgagtggcgaagcggcgttttacggcctgcaaccggtagatagcgatctg
cacgcattcgccgcacatcagtcgctgctgaaggcctatgaaaagctgcaacgcgccaaa
gcgacattctggacaaaatga
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